Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d17
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.5  
AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    25   2.7  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 430  PLVDDEGVSSSKEESNKAPA 371
            PL++ EG+   KE  N AP+
Sbjct: 2540 PLIEYEGIYEGKESENNAPS 2559


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 430  PLVDDEGVSSSKEESNKAPA 371
            PL++ EG+   KE  N AP+
Sbjct: 2541 PLIEYEGIYEGKESENNAPS 2560


>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
           protein OBPjj5c protein.
          Length = 155

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 563 PNDQLTSLHIIKKVS*SCCFIHIQKCFKWR 474
           PND LT  H+I+  S  C  I +   F  R
Sbjct: 64  PNDTLTWQHVIEVASKKCYIITVGDSFYLR 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,262
Number of Sequences: 2352
Number of extensions: 11784
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)