Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d16
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.9  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.6  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 311 TY*NWPVTCERISETAYFYCGSLSSQFTRLCNMGI 415
           T+ +W V    ++   Y +C SLS  F +   +GI
Sbjct: 56  TFKSWKVLYTSLTSFGYLFCASLS--FYKAFKIGI 88


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 164 SSRKHYLLYFNSNITLFISDKYI 96
           S++ +YL+  N N T  + +KY+
Sbjct: 14  STQPNYLILSNKNNTYLVLNKYL 36


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 355 GFTNPFACN 329
           GF NPF CN
Sbjct: 494 GFHNPFTCN 502


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 161 SRKHYLLYFNSNITLFISDKYIFNVLVDI 75
           SRK  + YF +++ L      + NVL DI
Sbjct: 54  SRKSRMNYFITHLALADLSVGLINVLTDI 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,585
Number of Sequences: 336
Number of extensions: 3122
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)