BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8d16
(632 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122236-1|AAM52748.1| 380|Drosophila melanogaster RH66343p pro... 63 3e-10
AE013599-1376|AAF58598.1| 351|Drosophila melanogaster CG8972-PA... 63 3e-10
AY118769-1|AAM50629.1| 414|Drosophila melanogaster GH11066p pro... 29 6.9
AE014297-3783|AAF56455.2| 414|Drosophila melanogaster CG10560-P... 29 6.9
BT029930-1|ABM92804.1| 467|Drosophila melanogaster IP11255p pro... 28 9.1
AE014296-3589|AAF51754.2| 403|Drosophila melanogaster CG7166-PA... 28 9.1
>AY122236-1|AAM52748.1| 380|Drosophila melanogaster RH66343p
protein.
Length = 380
Score = 63.3 bits (147), Expect = 3e-10
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +2
Query: 494 NLLVFGAWRIRALQPFMVKYFCSNPSGGAVCLPMVLSTFSHYSPLH 631
NL+ F WR+ AL+ M+ YF SNP+ VC PM LSTFSHYS +H
Sbjct: 184 NLVAFAMWRVPALKSTMITYFTSNPAAKVVCWPMFLSTFSHYSAMH 229
>AE013599-1376|AAF58598.1| 351|Drosophila melanogaster CG8972-PA
protein.
Length = 351
Score = 63.3 bits (147), Expect = 3e-10
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +2
Query: 494 NLLVFGAWRIRALQPFMVKYFCSNPSGGAVCLPMVLSTFSHYSPLH 631
NL+ F WR+ AL+ M+ YF SNP+ VC PM LSTFSHYS +H
Sbjct: 155 NLVAFAMWRVPALKSTMITYFTSNPAAKVVCWPMFLSTFSHYSAMH 200
>AY118769-1|AAM50629.1| 414|Drosophila melanogaster GH11066p
protein.
Length = 414
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 519 ALELYSLLWSNTSVPILQEVQYVFRWFFQHSAIIHH 626
A +LY L S+TS+ I E F WF+ HS ++ H
Sbjct: 293 AQDLYYFLLSSTSLDIKTEKFDYFVWFY-HSELVKH 327
>AE014297-3783|AAF56455.2| 414|Drosophila melanogaster CG10560-PA
protein.
Length = 414
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 519 ALELYSLLWSNTSVPILQEVQYVFRWFFQHSAIIHH 626
A +LY L S+TS+ I E F WF+ HS ++ H
Sbjct: 293 AQDLYYFLLSSTSLDIKTEKFDYFVWFY-HSELVKH 327
>BT029930-1|ABM92804.1| 467|Drosophila melanogaster IP11255p
protein.
Length = 467
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 516 GALELYSLLWSNTSVPILQEVQYVFRWFFQHSAIIH 623
G L+ Y+L W+ S+P L E++ ++R + H
Sbjct: 328 GFLDHYNLTWTIESIPPLDEIKLLYRRLLMNETYQH 363
>AE014296-3589|AAF51754.2| 403|Drosophila melanogaster CG7166-PA
protein.
Length = 403
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +3
Query: 516 GALELYSLLWSNTSVPILQEVQYVFRWFFQHSAIIH 623
G L+ Y+L W+ S+P L E++ ++R + H
Sbjct: 312 GFLDHYNLTWTIESIPPLDEIKLLYRRLLMNETYQH 347
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,197,219
Number of Sequences: 53049
Number of extensions: 531031
Number of successful extensions: 1135
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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