Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d14
         (649 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D567E7 Cluster: PREDICTED: similar to CG31025-PB...    47   5e-04
UniRef50_Q8MRN4 Cluster: GH12664p; n=5; Sophophora|Rep: GH12664p...    38   0.16 
UniRef50_Q8IHD6 Cluster: AT12234p; n=3; Sophophora|Rep: AT12234p...    37   0.48 
UniRef50_Q298X9 Cluster: GA16184-PA; n=1; Drosophila pseudoobscu...    34   3.4  

>UniRef50_UPI0000D567E7 Cluster: PREDICTED: similar to CG31025-PB,
            isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
            similar to CG31025-PB, isoform B - Tribolium castaneum
          Length = 1307

 Score = 46.8 bits (106), Expect = 5e-04
 Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +3

Query: 336  YQGIPPQIGHSQCALPCTGTLGVVPKNMGWLWTADN-VPGLKVKNGWKPGAISK 494
            Y G+   IGH +C LP       VP  MGWLW        LK + GW+PGAI+K
Sbjct: 1078 YPGV--HIGHKECVLPAHN----VPPRMGWLWNIFTPCLNLKPRRGWRPGAIAK 1125


>UniRef50_Q8MRN4 Cluster: GH12664p; n=5; Sophophora|Rep: GH12664p -
           Drosophila melanogaster (Fruit fly)
          Length = 998

 Score = 38.3 bits (85), Expect = 0.16
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +3

Query: 405 VPKNMGWLWTADNVPGLKVKNGWKPGAISKRL 500
           VP +MGWLWTA     L  K GW+PGAI + +
Sbjct: 603 VPSHMGWLWTAH---PLANKPGWRPGAIRRSI 631


>UniRef50_Q8IHD6 Cluster: AT12234p; n=3; Sophophora|Rep: AT12234p -
           Drosophila melanogaster (Fruit fly)
          Length = 905

 Score = 36.7 bits (81), Expect = 0.48
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +3

Query: 354 QIGHSQCALPCTGT-LGVVPKNMGWLWTADNVPGLKVKNGWKPGAISKRLLRIFN 515
           +IGH  C      T    +P +MGW+WT   +   K    W+PGAIS+ + ++ +
Sbjct: 579 RIGHLDCISGSKHTGYSRIPCHMGWMWTKSEMARHK---SWRPGAISRPIRQLMS 630


>UniRef50_Q298X9 Cluster: GA16184-PA; n=1; Drosophila
           pseudoobscura|Rep: GA16184-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 819

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 19/59 (32%), Positives = 28/59 (47%)
 Frame = +3

Query: 333 GYQGIPPQIGHSQCALPCTGTLGVVPKNMGWLWTADNVPGLKVKNGWKPGAISKRLLRI 509
           G +G P + GH  C      +   VP+  GW W   N    + K GW+PG I++   R+
Sbjct: 484 GDRGAPKKAGHKTCL----SSDRAVPRRHGWGWM--NTDEAR-KYGWRPGVIARSTSRV 535


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,273,923
Number of Sequences: 1657284
Number of extensions: 9992210
Number of successful extensions: 23402
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23396
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)