Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d14
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   0.94 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.2  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   2.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.6  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 174 HCQMYLTF*AYFYQQAYGIWDRGKSPVPY 88
           H  +Y+ F   FYQ    + D GK+ V Y
Sbjct: 174 HTSIYIIFFDMFYQHHKIVLDMGKNCVTY 202


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = -2

Query: 246 LTFCLMLPILNLYHFFDCRPSFYFHCQMYLTF*AYFYQQAYGIW 115
           L FC    I  ++  F     +YF+C + +    Y++ +A+ I+
Sbjct: 266 LLFCCAFIIFTMHLLF-LLCIYYFYCALIILLCIYYFCRAFIIF 308



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -2

Query: 246 LTFCLMLPILNLYHFFDCRPSFYFHCQMYLTF*AYFY 136
           L +C+++ +L +Y+F+     F  H  + L    YFY
Sbjct: 227 LFYCVLIILLCIYYFYYAFILFTVHL-LLLVCIYYFY 262


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -3

Query: 128 LMEYGTGENLLSLMKVLASIFVTSTCGTIRCF 33
           +  YG+  N+     V+ S+ +T   G   CF
Sbjct: 153 MRNYGSSINMKKRFVVMTSVIMTLALGNPYCF 184


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +3

Query: 87  HKGQEIFPCPIFHK--LVDKNKLKTLSTSGSESKK 185
           H G++ F CPI +K  +   +  K + T     KK
Sbjct: 369 HTGEKRFACPICNKRFMRSDHLAKHVKTHNGNGKK 403


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,470
Number of Sequences: 336
Number of extensions: 2779
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)