Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d10
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   3.9  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   3.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   3.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   5.2  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   6.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.0  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 500 HPWRRWSRISENDCRDGSAPPATRGCV-RPTPSWNATLTTPCAAV*TTDS 354
           HPW++  + + +     S+ P  R     PT S  + +T+ C++V TT S
Sbjct: 65  HPWKKSPQGAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTS-CSSVPTTAS 113


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 474 DSTPPPPGMVYLDHQ 518
           + TPP P  VY  HQ
Sbjct: 54  EETPPSPQEVYYHHQ 68


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 474 DSTPPPPGMVYLDHQ 518
           + TPP P  VY  HQ
Sbjct: 54  EETPPSPQEVYYHHQ 68


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 474 DSTPPPPGMVYLDHQ 518
           + TPP P  VY  HQ
Sbjct: 54  EETPPSPQEVYYHHQ 68


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 424 QPRVAGGALPSRQSFSE 474
           +P VAGG + S +SF+E
Sbjct: 105 EPGVAGGDVCSSESFNE 121


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 131 VNY*PLFNAGFEPYSL 84
           +NY P  + GF PY +
Sbjct: 330 LNYVPHISTGFSPYEI 345


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 355 ESVV*TAAHGVVRVAFHDGVGRTQPRVAGGALPSRQSFSEIR 480
           + V+   A G+VR AF D     + +VA   L    +  EIR
Sbjct: 454 QGVIGEGAFGIVRRAFLDLKEDNKTQVAVKMLKESPTSEEIR 495


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,160
Number of Sequences: 336
Number of extensions: 3038
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)