Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d09
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    23   3.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   3.0  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   5.3  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   9.2  

>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 242 ERGGLFSLLCPFIF*N 289
           E GGL +L+ PF+F N
Sbjct: 122 ELGGLGTLIAPFLFSN 137


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = -2

Query: 276 KGHKRLKRPPLSLFVMVYLILMISNDWRTCSLMWFSNEDIR 154
           K H  L    L L++ V  IL++ + +    + +F   D+R
Sbjct: 245 KDHNSLYSLHLLLWITVTFILLVGDSYIVMYVFFFHLSDVR 285


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 145 IDKIVQVCTYIVRLKI 98
           +D I  VC+Y+VR K+
Sbjct: 159 VDLIGNVCSYVVRDKL 174


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 160 YSFRFIDKIVQVCTYIV 110
           +   FID  +Q CT+++
Sbjct: 38  FDVNFIDPALQFCTHLI 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,697
Number of Sequences: 336
Number of extensions: 3119
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)