Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d09
         (673 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   0.94 
AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    25   1.6  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   2.9  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   2.9  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   3.8  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   5.0  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   6.6  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 0.94
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = +3

Query: 378  LDLYFVRERNSKREIKLLNMLLFIKSTLWKVLFGKEADKLEHANDDERTYYII 536
            LDL   R + S  +++++N   F+K T  KVL  +++  L  AN  E  ++I+
Sbjct: 913  LDLCPQRVKLSAHQLEMVNC--FVKYTFTKVLRLQKSLMLYDANATENCFFIV 963


>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = +3

Query: 396 RERNSKREIKLLNMLLFIKST--LWK 467
           RERN+ +    LN+LL IK+T  LW+
Sbjct: 259 RERNNVKRNDFLNLLLQIKNTGKLWE 284


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -2

Query: 591 MNPCLLVHL*TYLQEHLSR*YSRSFHHHLH 502
           +N C L    T+L  H S    R  HHH H
Sbjct: 410 LNTCRLHGSPTHLHNHRSGGGGRHHHHHHH 439


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 524 LLYYRERCSCK*VYKCTKRQGFIKLC 601
           ++Y   R   +   K +KRQ F+KLC
Sbjct: 312 IVYIAARSELQRAIKASKRQHFLKLC 337


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 285 EIVQYSQNRSHSIQDLQFKLSEIGQDVGTRLLDLYFVRERN 407
           E++Q + NRS S QDL      + +     +++L+ V   N
Sbjct: 2   EVLQINVNRSRSAQDLALNTMRVERADVCLMVELHSVPRNN 42


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 107 SHYICTYLNYFVNKSKRISSLENHINEH 190
           S Y+C Y NY  NK   +  L  H+  H
Sbjct: 125 STYMCNYCNYTSNK---LFLLSRHLKTH 149



 Score = 23.0 bits (47), Expect = 8.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 152 KRISSLENHINEH 190
           K ++SL+NH+N H
Sbjct: 165 KTLASLQNHVNTH 177


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = +3

Query: 312  SHSIQDLQFKLSEIGQDVGTRLLDLYFVRERNSKREIKLLNMLLFIKST 458
            S+ + DLQ+++S + + +     +L  + E   KRE  L+ + +  + T
Sbjct: 1062 SYKLPDLQYQISILEEKLNANKPNLSVIDEFLKKREAYLMRVAVLEEIT 1110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,597
Number of Sequences: 2352
Number of extensions: 12518
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)