Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d09
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117195-11|CAB55019.1|  185|Caenorhabditis elegans Hypothetical...   192   1e-49
U40953-3|AAB52650.1|  342|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>AL117195-11|CAB55019.1|  185|Caenorhabditis elegans Hypothetical
           protein Y57A10A.16 protein.
          Length = 185

 Score =  192 bits (469), Expect = 1e-49
 Identities = 89/152 (58%), Positives = 117/152 (76%)
 Frame = +3

Query: 216 ILDKPLRKGKGEVSLAFYALLFSEIVQYSQNRSHSIQDLQFKLSEIGQDVGTRLLDLYFV 395
           ILDK L +GK E++L+ +A+LFSE+V Y+QNRS ++ D+  K++  G+ VG R+ D+  +
Sbjct: 7   ILDKSLSRGKTEINLSTFAVLFSEMVLYAQNRSETVTDIHDKIASYGKQVGLRMFDIITL 66

Query: 396 RERNSKREIKLLNMLLFIKSTLWKVLFGKEADKLEHANDDERTYYIIEKDALVNKFISVP 575
           RE+  KRE KLL ML+FIKST+WK LFGKEADKLE +NDD  TY +IEKD +VN +ISVP
Sbjct: 67  REKGYKRETKLLGMLMFIKSTVWKNLFGKEADKLERSNDDHCTYLLIEKDPMVNTYISVP 126

Query: 576 KDKGSLNCAIFNAGIIEAVLTRSGFPAKVTAH 671
           +DKG LNCA F AGI+EA+L  + F  KVTAH
Sbjct: 127 RDKGVLNCAAFAAGIVEAILESASFKCKVTAH 158


>U40953-3|AAB52650.1|  342|Caenorhabditis elegans Hypothetical
           protein F53B1.4 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -3

Query: 578 FWYTYKLIYKSIFLDNIVGP 519
           +W++YKL Y  + ++N+ GP
Sbjct: 178 YWHSYKLPYVMVRMNNVYGP 197


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,077,384
Number of Sequences: 27780
Number of extensions: 288200
Number of successful extensions: 748
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)