Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8d09
(673 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 25 0.50
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 25 0.87
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 25 0.87
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 25 0.87
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 25 0.87
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 25 0.87
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 25 0.87
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 24 1.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 2.6
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 3.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 3.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 3.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 3.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 3.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 3.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 3.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 3.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 3.5
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 4.6
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 4.6
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 8.1
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 25.4 bits (53), Expect = 0.50
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 516 HHHLHVPVYQLLYQKAP 466
HHHLH +Q+LYQ++P
Sbjct: 73 HHHLHH--HQVLYQQSP 87
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.87
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSKYQI 101
+T ++R PK + ++N+ N NY+ N+ Q+
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYNNNNYKQL 102
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.87
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSKYQI 101
+T ++R PK + ++N+ N NY+ N+ Q+
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYNNNNYKQL 102
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.87
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSKYQI 101
+T ++R PK + ++N+ N NY+ N+ Q+
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYNNNNYKQL 102
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.87
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSKYQI 101
+T ++R PK + ++N+ N NY+ N+ Q+
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYNNNNYKQL 102
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.87
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSKYQI 101
+T ++R PK + ++N+ N NY+ N+ Q+
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYNNNNYKQL 102
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.87
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSKYQI 101
+T ++R PK + ++N+ N NY+ N+ Q+
Sbjct: 70 RTERERSKEPKIISSLSNNYNYSNYNNNNYKQL 102
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINY-HLNSKYQILSLTIY 119
+T ++R PK + ++N+ N NY + N+ Y + +Y
Sbjct: 70 RTERERSREPKIISSLSNNYNYSNYNNYNNNYNNYNKKLY 109
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSK---YQILSL 110
+T +++ PK + ++N+ N NY+ N K Y I+++
Sbjct: 303 RTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNIINI 341
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSK 92
+T +++ PK + ++N+ N NY+ N K
Sbjct: 70 RTEREKSKEPKIISSLSNNYNYNNYNNNYK 99
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSK 92
+T +++ PK + ++N+ N NY+ N K
Sbjct: 70 RTEREKSKEPKIISSLSNNYNYNNYNNNYK 99
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSK 92
+T +++ PK + ++N+ N NY+ N K
Sbjct: 70 RTEREKSKEPKIISSLSNNYNYNNYNNNYK 99
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSK 92
+T +++ PK + ++N+ N NY+ N K
Sbjct: 70 RTEREKSKEPKIISSLSNNYNYNNYNNNYK 99
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSK 92
+T +++ PK + ++N+ N NY+ N K
Sbjct: 303 RTEREKSKEPKIISSLSNNYNYNNYNNNYK 332
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSK 92
+T +++ PK + ++N+ N NY+ N K
Sbjct: 303 RTEREKSKEPKIISSLSNNYNYNNYNNNYK 332
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSK 92
+T +++ PK + ++N+ N NY+ N K
Sbjct: 303 RTEREKSKEPKIISSLSNNYNYNNYNNNYK 332
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSK 92
+T +++ PK + ++N+ N NY+ N K
Sbjct: 303 RTEREKSKEPKIISSLSNNYNYNNYNNNYK 332
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 3 KTSQKRLIRPKFLFLINNSINKINYHLNSK 92
+T +++ PK + ++N+ N NY+ N K
Sbjct: 292 RTEREKSKEPKIISSLSNNYNYNNYNNNYK 321
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 3 KTSQKRLIRPKFLF-LINNSINKINYHLNSKYQILSL 110
+ ++R PK + L NN+I+ NY+ Y I+++
Sbjct: 303 RIERERSREPKIISSLSNNTIHNNNYNKKLYYNIINI 339
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 534 IEKDALVNKFISVPKDKGSLNC 599
++ LV +F+ VPKD ++C
Sbjct: 530 VDGQRLVYQFVDVPKDIIEIDC 551
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.4 bits (43), Expect = 8.1
Identities = 6/24 (25%), Positives = 15/24 (62%)
Frame = -3
Query: 542 FLDNIVGPFIIICMFQFISFFTKK 471
FL + GP +++ + ++SF+ +
Sbjct: 216 FLIQVYGPCVLLVVLSWVSFWLNR 239
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,064
Number of Sequences: 438
Number of extensions: 3444
Number of successful extensions: 22
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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