Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d07
         (638 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q97J30 Cluster: Sugar-binding periplasmic protein; n=1;...    36   0.82 
UniRef50_Q8UKE8 Cluster: Putative uncharacterized protein Atu517...    34   2.5  
UniRef50_Q6IG88 Cluster: HDC06940; n=1; Drosophila melanogaster|...    33   5.8  

>UniRef50_Q97J30 Cluster: Sugar-binding periplasmic protein; n=1;
           Clostridium acetobutylicum|Rep: Sugar-binding
           periplasmic protein - Clostridium acetobutylicum
          Length = 439

 Score = 35.9 bits (79), Expect = 0.82
 Identities = 17/63 (26%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +3

Query: 252 AWCRPVKTTSRVISDSMQKITKKLTELMMKCQNERRGKMKKK-NRWVNQPLLLGEDPDVN 428
           +W  P + T ++++D + K  K    + +K  +   G +K+  + W++Q +LLG++PDV 
Sbjct: 46  SWNTPSENTYKILNDDILKFEKSHPGVKIKYTS---GILKEDFSEWISQKILLGKEPDVF 102

Query: 429 LLV 437
           +++
Sbjct: 103 MIL 105


>UniRef50_Q8UKE8 Cluster: Putative uncharacterized protein Atu5174;
           n=1; Agrobacterium tumefaciens str. C58|Rep: Putative
           uncharacterized protein Atu5174 - Agrobacterium
           tumefaciens (strain C58 / ATCC 33970)
          Length = 183

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +1

Query: 409 GRTRT*TSWSCKQDRRGPTRQKWRGTGLWQGWIGWRLFRKKRNAVSRKRCRWK 567
           G TR   +   + DR+G  R+ WRG   +  W+G R   ++R    R+R  W+
Sbjct: 41  GCTRLRGTDRVQPDRKG--RRHWRGERCYHRWVGKRYLGRRRGGSRRRRRGWR 91


>UniRef50_Q6IG88 Cluster: HDC06940; n=1; Drosophila
           melanogaster|Rep: HDC06940 - Drosophila melanogaster
           (Fruit fly)
          Length = 159

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +1

Query: 430 SWSCKQDRRGPTRQKWRGTGLWQGWIGWRLF 522
           SW C       TR++WR TG+WQG   W  F
Sbjct: 98  SWLCSLQSGFSTRRRWR-TGVWQGLECWMAF 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,024,186
Number of Sequences: 1657284
Number of extensions: 8262637
Number of successful extensions: 21779
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21757
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)