Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d07
         (638 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66561-7|CAB54206.2|  419|Caenorhabditis elegans Hypothetical pr...    31   0.70 
AF304127-1|AAG50240.1|  419|Caenorhabditis elegans innexin protein.    31   0.70 

>Z66561-7|CAB54206.2|  419|Caenorhabditis elegans Hypothetical
           protein F08G12.10 protein.
          Length = 419

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
 Frame = -1

Query: 623 FYLACFAIPIHLWSLRTYSFHRH--LFLETAFRFF---LKSRHPIHPCQS 489
           F  A F +P HLW+L    FH+   + L+ + RFF   LK   P   C+S
Sbjct: 113 FQAAMFVLPYHLWNL----FHKRTTINLKGSLRFFEGALKKLEPAQACES 158


>AF304127-1|AAG50240.1|  419|Caenorhabditis elegans innexin protein.
          Length = 419

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
 Frame = -1

Query: 623 FYLACFAIPIHLWSLRTYSFHRH--LFLETAFRFF---LKSRHPIHPCQS 489
           F  A F +P HLW+L    FH+   + L+ + RFF   LK   P   C+S
Sbjct: 113 FQAAMFVLPYHLWNL----FHKRTTINLKGSLRFFEGALKKLEPAQACES 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,462,373
Number of Sequences: 27780
Number of extensions: 203651
Number of successful extensions: 531
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)