Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8d04
(622 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34493| Best HMM Match : Pyr_redox_dim (HMM E-Value=0) 61 8e-10
SB_7540| Best HMM Match : Transgly_assoc (HMM E-Value=0.46) 52 5e-07
SB_27553| Best HMM Match : Pyr_redox (HMM E-Value=1.1e-20) 43 2e-04
SB_7963| Best HMM Match : Pyr_redox_dim (HMM E-Value=2.2e-39) 34 0.11
SB_47418| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 31 1.00
SB_1519| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 1.7
SB_22785| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_2355| Best HMM Match : Carn_acyltransf (HMM E-Value=0) 29 2.3
SB_28511| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_19455| Best HMM Match : Amino_oxidase (HMM E-Value=0.0003) 29 4.0
SB_2980| Best HMM Match : DUF814 (HMM E-Value=2.10195e-44) 28 5.3
SB_53724| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22) 28 7.0
SB_57965| Best HMM Match : WSC (HMM E-Value=0.00054) 27 9.3
SB_3584| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_54640| Best HMM Match : TolA (HMM E-Value=1.7) 27 9.3
SB_28920| Best HMM Match : Pyr_redox_2 (HMM E-Value=0.24) 27 9.3
SB_28160| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 27 9.3
>SB_34493| Best HMM Match : Pyr_redox_dim (HMM E-Value=0)
Length = 394
Score = 60.9 bits (141), Expect = 8e-10
Identities = 29/56 (51%), Positives = 35/56 (62%)
Frame = +1
Query: 244 YDLAVIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGGTCVNVGCIPKK 411
YD VIGGGSGG+A A+ A G K V+++ LGGTCVNVGC+PKK
Sbjct: 51 YDYVVIGGGSGGIASARRAAEFGVKAVVIEHAR---------LGGTCVNVGCVPKK 97
>SB_7540| Best HMM Match : Transgly_assoc (HMM E-Value=0.46)
Length = 320
Score = 51.6 bits (118), Expect = 5e-07
Identities = 29/75 (38%), Positives = 40/75 (53%)
Frame = +1
Query: 220 PEEAGTYDYDLAVIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGGTCVNVGC 399
P +YD+ +IGGG GG A A LG KV ++ + LGGTC+NVGC
Sbjct: 250 PRSNSMSNYDVLIIGGGPGGYNAAIRAGQLGLKVACIE--------GRETLGGTCLNVGC 301
Query: 400 IPKKLMHQAALLGES 444
+P K + A+ L E+
Sbjct: 302 MPSKALLHASELYEA 316
>SB_27553| Best HMM Match : Pyr_redox (HMM E-Value=1.1e-20)
Length = 1037
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +1
Query: 217 PPEEAGTYDYDLAVIGGGSGGLACAKEAV 303
PP + +Y+YDL VIGGGSGGLACAK +
Sbjct: 662 PP--SASYEYDLIVIGGGSGGLACAKNHI 688
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 529 QNHIKSVNWVTRVDLREXKIDY 594
+NHI S+NW RV LRE + Y
Sbjct: 685 KNHIGSLNWGYRVQLREKSVTY 706
>SB_7963| Best HMM Match : Pyr_redox_dim (HMM E-Value=2.2e-39)
Length = 387
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1
Query: 241 DYDLAVIGGGSGGLACAKEAVNLGAKVTV 327
+ DL VIG G GG A +A LG KVTV
Sbjct: 34 EVDLVVIGSGPGGYVAAIKAAQLGMKVTV 62
>SB_47418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 241 DYDLAVIGGGSGGLACAKEAVNLGAKVTVLD 333
+ D VIG G GG+ CA G K+ VL+
Sbjct: 85 EVDAVVIGSGIGGMTCASLLAKTGKKILVLE 115
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 30.7 bits (66), Expect = 1.00
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 244 YDLAVIGGGSGGLACAKEAVNLGAKVT 324
YD+A++GGG GLA A+E + K+T
Sbjct: 152 YDVAIVGGGIVGLATARELILRHPKLT 178
>SB_1519| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 943
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -3
Query: 314 APKFTASLAHASPPEPPPITARS*SYVPASSGGDRAGILAKTVDSVF 174
AP A+ H S P+P + + +V A S RAG+L + +F
Sbjct: 893 APPEPATKKHVSQPKPKHVAKKKKQHVKAGSNTLRAGLLGAVLAFIF 939
>SB_22785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 277 GLACAK--EAVNLGAKVTVLDYVTPSPQGTKWGLGGTCVNVGCI 402
GL+ AK AVNL A + LDY T S +G GL CV V I
Sbjct: 93 GLSVAKFKMAVNLTA-ILNLDYSTESTRGRSCGLSAQCVAVETI 135
>SB_2355| Best HMM Match : Carn_acyltransf (HMM E-Value=0)
Length = 1559
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 235 TYDYDLAVIGGGSGGLACAKEAVNLGAKVTVLDYVTPS--PQGTKWG 369
TYD +++ L C ++ V LG + + Y PS PQGTK G
Sbjct: 286 TYDLPNSIVSWIVDFLTCRRQRVKLGQQCYLDWYTIPSGFPQGTKLG 332
>SB_28511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +1
Query: 247 DLAVIGGGSGGLACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGG 378
D+ VIGGGS G + +G K +L GT W G
Sbjct: 110 DVVVIGGGSVGTSTLYHLTKMGVKNVILLERDKLTSGTTWHSAG 153
>SB_19455| Best HMM Match : Amino_oxidase (HMM E-Value=0.0003)
Length = 658
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 244 YDLAVIGGGSGGLACAKEAVNLGAKVTVLD 333
+ +AV+GGG GLA A ++ G V +L+
Sbjct: 8 FTVAVVGGGVAGLAAAASLIDKGFDVKLLE 37
>SB_2980| Best HMM Match : DUF814 (HMM E-Value=2.10195e-44)
Length = 950
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 259 LQPDHSRMFLPLREGIEQGFWRKQLIPFSLDLIDREIYCI 140
++ DH + L+ E + QLI +LDL+DR I +
Sbjct: 32 VKKDHEKRIQQLQSAQEADVRKAQLIEINLDLVDRAILVV 71
>SB_53724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1005
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 250 LAVIGGGSGGLACAKEAVNLGAKVTVLD 333
+ VIGGG GL+ A N+GA V D
Sbjct: 161 MLVIGGGVAGLSAMAHAKNMGAIVRAFD 188
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -3
Query: 392 TLTQVPPRPHLVPCGEGVT*SNTVTLAPKF-TASLAHASPPEPPP 261
TL PP P P G +T P T+S A+ PP PPP
Sbjct: 717 TLGPPPPAPPPPPLGRDSAAVFMLTWTPLTNTSSAANVPPPPPPP 761
>SB_32707| Best HMM Match : Peptidase_A17 (HMM E-Value=4.8e-22)
Length = 2269
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 250 LAVIGGGSGGLACAKEAVNLGAKVTVLD 333
+AV+GGG GLA A ++ G V +L+
Sbjct: 1910 VAVVGGGVAGLAAAASLIDKGFDVKLLE 1937
>SB_57965| Best HMM Match : WSC (HMM E-Value=0.00054)
Length = 221
Score = 27.5 bits (58), Expect = 9.3
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Frame = +1
Query: 217 PPEEA-GTYDYDLAVIGGGSGG--LACAKEAVNLGAKVTVLDYVTPSPQGTKWGLGGTCV 387
PPE A G + GGGS +C + VN G+ V V + GT L TC
Sbjct: 60 PPEWATGLWSECTKKCGGGSQVRVTSCRRTLVN-GSVVEVPTELCVQETGTTPSLTQTCN 118
Query: 388 NVGCIPKKLMHQAALLGESIHE 453
N C K + A + H+
Sbjct: 119 NFACFQWKTEYSCANCSDYYHK 140
>SB_3584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 470
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 250 LAVIGGGSGGLACAKEAVNLGAKVTVLD 333
+A+IG G+ GL KEA++ G + T +
Sbjct: 5 VAIIGAGASGLCSIKEALDAGLEPTAYE 32
>SB_54640| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 589
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 94 RV*CYAEMDVCINRSKCNRFRDQSDPMKTESTVFA 198
RV + DVCI R K RF D D + + T++A
Sbjct: 61 RVRVWLSDDVCIPRYKYFRFNDVIDDVTPQLTIYA 95
>SB_28920| Best HMM Match : Pyr_redox_2 (HMM E-Value=0.24)
Length = 284
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 256 VIGGGSGGLACAKEAVNLGAKVTVLD 333
VIG G GL A EA LGA+V V++
Sbjct: 65 VIGSGPCGLRSALEAALLGAQVMVIE 90
>SB_28160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 154 RDQSDPMKTESTVFAKIPARSPPEEAGTYDYDLAVI 261
R P+ ST F K A PP+ G Y+LAV+
Sbjct: 191 RHHQAPLHELSTQFTKGRAPPPPDVCGVGGYNLAVV 226
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = -3
Query: 395 PTLTQVPPRPHLVPCGEGVT*SNTVTLAPKFTASLAHASPPEPPPITARS*SYVPA 228
P LT P + P +G T T T P T + + P PP TAR S PA
Sbjct: 565 PPLTSTAAEPVVTPTTKGKT---TTTGHPTKTPTTT-SGPTHPPTTTARPTSTAPA 616
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,577,544
Number of Sequences: 59808
Number of extensions: 472279
Number of successful extensions: 1248
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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