Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d03
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.4  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = +2

Query: 263 FGVMANGQITMVRGACYIAAQILGSIVGSSVAYAVTVSSLRSTLGTTVPNPNLRAEQIF 439
           FGV   G++  + G+       L + +    +  +TVS LR   G  V +  L ++  +
Sbjct: 98  FGVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNLTVSGLRCVNGIPVSSKTLASQSAY 156


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = +2

Query: 263 FGVMANGQITMVRGACYIAAQILGSIVGSSVAYAVTVSSLRSTLGTTVPNPNLRAEQIF 439
           FGV   G++  + G+       L + +    +  +TVS LR   G  V +  L ++  +
Sbjct: 98  FGVAYPGELLAILGSSGAGKTTLLNTLTFHTSSNLTVSGLRCVNGIPVSSKTLASQSAY 156


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 271 DG-QRSNYDGQRCLLYRSADTWLHSRFISGL 360
           DG +R+ Y   + L YR+   W+H+  I  L
Sbjct: 197 DGYKRAVYKIGQLLTYRAPRPWIHNETIYSL 227


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 637 VGFPLGVLGWANF 675
           + FPLGVL   NF
Sbjct: 652 INFPLGVLDRGNF 664


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,258
Number of Sequences: 336
Number of extensions: 4124
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)