Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8d02
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.055
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       24   1.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   3.6  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   4.8  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.4  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.4  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.4  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   8.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.055
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 102 VFKLFCLCFYHFFVCFNLF 46
           V  LF LC YHFF  F +F
Sbjct: 158 VHLLFLLCIYHFFCAFIIF 176



 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 90  FCLCFYHFFVCFNLF 46
           F LC Y+F+  F +F
Sbjct: 142 FLLCIYYFYCAFIIF 156



 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 618 WFDYAKDICIHNQEAVICILFLHHHQLRFCFSAFVF 511
           +F YA  +   +   ++CI + ++  L FC +  +F
Sbjct: 240 YFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIF 275



 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 93  LFCLCFYHFFVCFNLF 46
           +  LC Y+F+  F LF
Sbjct: 233 IILLCIYYFYYAFILF 248



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = -3

Query: 102 VFKLFCLCFYHFFVCFNLFKFCTKNFMSFF 13
           V  LF LC Y+F V    F  C   F   F
Sbjct: 125 VHLLFLLCIYYFVVPL-FFLLCIYYFYCAF 153


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 606 AKDICIHNQEAVICILFLHHHQLRFCFSA 520
           + D+C+   E+++  L  +HHQL   F A
Sbjct: 117 SNDVCLAIPESLVIKLVDYHHQLLGHFGA 145


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 562 YTYYSFLIMYTNVLCI 609
           Y Y+SF ++ T ++C+
Sbjct: 319 YFYWSFALLITRIVCL 334


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 206  CLVPRDGASSEARTKPRPASAGPTT 280
            C++ RD      +TKP+P +  PTT
Sbjct: 2199 CILGRDND----KTKPKPTTMKPTT 2219


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 433 ILSG*VEMLTVFLCHRKGYKGTSIRVQIQRPL 338
           I +G    +  F+C    Y    +RVQ Q+ L
Sbjct: 323 INAGLAIFILYFICDEAHYASNCLRVQFQKKL 354


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 467 DPGESISAPSVFPYMKTKAEK 529
           DP + + + S F Y+K  +E+
Sbjct: 143 DPDDELRSSSAFSYIKPSSER 163


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -1

Query: 236 PKMLHREEPGRPAADST*HRYGGPRKCSSLSS 141
           P  +    PG+PA  +T      P   +S +S
Sbjct: 146 PLSVSTSPPGKPATSTTSQNLSSPASSTSSTS 177


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 473 GESISAPSVFPYMK 514
           G+S + P ++P+MK
Sbjct: 192 GQSSNPPQIYPWMK 205


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 473 GESISAPSVFPYMK 514
           G+S + P ++P+MK
Sbjct: 192 GQSSNPPQIYPWMK 205


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 473 GESISAPSVFPYMK 514
           G+S + P ++P+MK
Sbjct: 192 GQSSNPPQIYPWMK 205


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 473 GESISAPSVFPYMK 514
           G+S + P ++P+MK
Sbjct: 192 GQSSNPPQIYPWMK 205


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 473 GESISAPSVFPYMK 514
           G+S + P ++P+MK
Sbjct: 148 GQSSNPPQIYPWMK 161


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 473 GESISAPSVFPYMK 514
           G+S + P ++P+MK
Sbjct: 192 GQSSNPPQIYPWMK 205


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 473 GESISAPSVFPYMK 514
           G+S + P ++P+MK
Sbjct: 192 GQSSNPPQIYPWMK 205


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,962
Number of Sequences: 336
Number of extensions: 3505
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)