Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8d02
(623 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 30 1.5
U80839-12|AAB37918.1| 252|Caenorhabditis elegans Hypothetical p... 30 1.5
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 30 1.5
Z68336-3|CAA92735.1| 710|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical pr... 27 8.2
U58752-1|AAB00664.1| 377|Caenorhabditis elegans P38 map kinase ... 27 8.2
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 8.2
AC006714-14|AAK29720.2| 264|Caenorhabditis elegans F-box a prot... 27 8.2
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +2
Query: 272 PTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKINQQI 451
P +++ F LLD K R L P R P + + + + L + ++
Sbjct: 43 PRSEDSFDLLDPANASKEPSASTRPLPYPPTRPPEVVIQIDEVESPILGLIDETDDHE-- 100
Query: 452 LDGYLDPGESISAPSV 499
LDG LDP S A S+
Sbjct: 101 LDGRLDPASSFDANSL 116
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +2
Query: 272 PTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKINQQI 451
P +++ F LLD K R L P R P + + + + L + ++
Sbjct: 43 PRSEDSFDLLDPANASKEPSASTRPLPYPPTRPPEVVIQIDEVESPILGLIDETDDHE-- 100
Query: 452 LDGYLDPGESISAPSV 499
LDG LDP S A S+
Sbjct: 101 LDGRLDPASSFDANSL 116
>U80839-12|AAB37918.1| 252|Caenorhabditis elegans Hypothetical
protein ZC204.12 protein.
Length = 252
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 128 FQFCKMTSCCTCEGH-HSGAKSSLPLVCLVPRDGASSEARTKPRP-ASAGPTTQND 289
++ C M + C E H G+ + + + +S ++ KP+P A PT +ND
Sbjct: 98 YEVCAMFTECETENHFEKGSDLRFEVELTIVMENSSKKSSVKPKPEAKQEPTKEND 153
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/76 (27%), Positives = 32/76 (42%)
Frame = +2
Query: 272 PTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKINQQI 451
P +++ F LLD K R L P R P + + + + L + ++
Sbjct: 43 PRSEDSFDLLDPANASKEPSASTRPLPYPPTRPPEVVIQIDEVESPILGLIDETDDHE-- 100
Query: 452 LDGYLDPGESISAPSV 499
LDG LDP S A S+
Sbjct: 101 LDGRLDPASSFDANSL 116
>Z68336-3|CAA92735.1| 710|Caenorhabditis elegans Hypothetical
protein F22B3.4 protein.
Length = 710
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 207 AWFLAMEHLRKPGQSPGLHQLGPQLKMISSCSTRSTSGKTLSCHRGRC 350
A+ LA + R PGQ + P L I S ST TS +S +GRC
Sbjct: 181 AFALAFKSSRFPGQLVASRRGSPLLVGIKSNSTLHTSHFPVSYSKGRC 228
>Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical
protein F25H9.3 protein.
Length = 352
Score = 27.5 bits (58), Expect = 8.2
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -3
Query: 585 NQEAVICILFLHHHQLRFCFSAFVFIYGKTLGADIDS--PGSK*PSNICWL 439
N EAV C ++ H Q C F I K A+ + G K PS C+L
Sbjct: 21 NLEAVKCHRYVLHSQDDSCEGDFCVIQRKAFSANYQTCITGPKIPSTTCFL 71
>U58752-1|AAB00664.1| 377|Caenorhabditis elegans P38 map kinase
family protein 1 protein.
Length = 377
Score = 27.5 bits (58), Expect = 8.2
Identities = 24/96 (25%), Positives = 44/96 (45%)
Frame = +2
Query: 227 ASSEARTKPRPASAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDC 406
+S EAR R + T+ DF+ L + + L ++ L+LDP RR P +E
Sbjct: 262 SSEEARNYIR--NLPKMTRRDFKRLFAQATPQAIDLLEKMLHLDPDRR-----PTAKEAM 314
Query: 407 KHFNLARKYKINQQILDGYLDPGESISAPSVFPYMK 514
+H LA + + + +D + + A ++ + K
Sbjct: 315 EHEYLAAYHDETDEPIAEEMDLNDDVRADTIDEWKK 350
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 131 QFCKMTSCCTCEGHHSGAKSSLPLVCLVPRDGASSEARTK 250
++C S C C G ++G ++ VCL PR + + K
Sbjct: 1313 RYC-FPSGCQCSGAYTGTQACANSVCLFPRTSCCAPYKKK 1351
>AC006714-14|AAK29720.2| 264|Caenorhabditis elegans F-box a protein
protein 77 protein.
Length = 264
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 267 LGPQLKMISSCSTRSTSGKTLSCH 338
L LK + +C+TRS K LSCH
Sbjct: 102 LASTLKNLENCTTRSLLLKDLSCH 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,692,794
Number of Sequences: 27780
Number of extensions: 324270
Number of successful extensions: 1021
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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