BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8c23
(591 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC051877-1|AAH51877.1| 557|Homo sapiens ariadne homolog, ubiqui... 113 6e-25
AJ243190-1|CAB45870.1| 557|Homo sapiens UbcH 7-binding protein ... 113 6e-25
AJ130976-1|CAA10274.1| 463|Homo sapiens Ariadne protein (ARI) p... 113 6e-25
AF072832-1|AAD28088.1| 557|Homo sapiens UbcH 7-binding protein ... 113 6e-25
AB209432-1|BAD92669.1| 526|Homo sapiens Ariadne-1 protein homol... 77 4e-14
BC063861-1|AAH63861.1| 1206|Homo sapiens ANKIB1 protein protein. 35 0.25
AB037807-1|BAA92624.1| 1214|Homo sapiens KIAA1386 protein protein. 35 0.25
AY319414-1|AAP83847.1| 657|Homo sapiens outer dense fiber of sp... 32 1.3
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 32 1.7
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 32 1.7
>BC051877-1|AAH51877.1| 557|Homo sapiens ariadne homolog,
ubiquitin-conjugating enzyme E2 binding protein, 1
(Drosophila protein.
Length = 557
Score = 113 bits (271), Expect = 6e-25
Identities = 53/105 (50%), Positives = 76/105 (72%)
Frame = +3
Query: 270 EEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQ 449
E+Y YEVL+ E+I+QHMV+CI+EVN V++ PAT TRILL+HF WDKEKLMER++DG+ ++
Sbjct: 97 EDYRYEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFDGNLEK 156
Query: 450 LFSEARVINPFRKPVIQRPKLPRRISTSGMEXM*NMFLSFTNLYY 584
LF+E VINP +K + ++ R S M +L++ N Y+
Sbjct: 157 LFAECHVINPSKKS--RTRQMNTRSSAQDMPCQ-ICYLNYPNSYF 198
>AJ243190-1|CAB45870.1| 557|Homo sapiens UbcH 7-binding protein
protein.
Length = 557
Score = 113 bits (271), Expect = 6e-25
Identities = 53/105 (50%), Positives = 76/105 (72%)
Frame = +3
Query: 270 EEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQ 449
E+Y YEVL+ E+I+QHMV+CI+EVN V++ PAT TRILL+HF WDKEKLMER++DG+ ++
Sbjct: 97 EDYRYEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFDGNLEK 156
Query: 450 LFSEARVINPFRKPVIQRPKLPRRISTSGMEXM*NMFLSFTNLYY 584
LF+E VINP +K + ++ R S M +L++ N Y+
Sbjct: 157 LFAECHVINPSKKS--RTRQMNTRSSAQDMPCQ-ICYLNYPNSYF 198
>AJ130976-1|CAA10274.1| 463|Homo sapiens Ariadne protein (ARI)
protein.
Length = 463
Score = 113 bits (271), Expect = 6e-25
Identities = 53/105 (50%), Positives = 76/105 (72%)
Frame = +3
Query: 270 EEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQ 449
E+Y YEVL+ E+I+QHMV+CI+EVN V++ PAT TRILL+HF WDKEKLMER++DG+ ++
Sbjct: 3 EDYRYEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYFDGNLEK 62
Query: 450 LFSEARVINPFRKPVIQRPKLPRRISTSGMEXM*NMFLSFTNLYY 584
LF+E VINP +K + ++ R S M +L++ N Y+
Sbjct: 63 LFAECHVINPSKKS--RTRQMNTRSSAQDMPCQ-ICYLNYPNSYF 104
>AF072832-1|AAD28088.1| 557|Homo sapiens UbcH 7-binding protein
protein.
Length = 557
Score = 113 bits (271), Expect = 6e-25
Identities = 53/105 (50%), Positives = 76/105 (72%)
Frame = +3
Query: 270 EEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQ 449
E+Y YEVL+ E+I+QHMV+CI+EVN V++ PAT TRILL+HF WDKEKLMER++DG+ ++
Sbjct: 97 EDYRYEVLTAEQILQHMVECIREVNDVIQNPATITRILLSHFNWDKEKLMERYFDGNLEK 156
Query: 450 LFSEARVINPFRKPVIQRPKLPRRISTSGMEXM*NMFLSFTNLYY 584
LF+E VINP +K + ++ R S M +L++ N Y+
Sbjct: 157 LFAECHVINPSKKS--RTRQMNTRSSAQDMPCQ-ICYLNYPNSYF 198
>AB209432-1|BAD92669.1| 526|Homo sapiens Ariadne-1 protein homolog
variant protein.
Length = 526
Score = 77.4 bits (182), Expect = 4e-14
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +3
Query: 336 EVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQLFSEARVINPFRKPVIQRPKLP 515
E N V++ PAT TRILL+HF WDKEKLMER++DG+ ++LF+E VINP +K + ++
Sbjct: 88 EFNEVIQNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVINPSKKS--RTRQMN 145
Query: 516 RRISTSGMEXM*NMFLSFTNLYY 584
R S M +L++ N Y+
Sbjct: 146 TRSSAQDMPCQ-ICYLNYPNSYF 167
>BC063861-1|AAH63861.1| 1206|Homo sapiens ANKIB1 protein protein.
Length = 1206
Score = 34.7 bits (76), Expect = 0.25
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 219 FAMDVETHSTRERQTELEEY-PYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHF 395
F+ D E L++ PYE L +++ + I E +++ P T LL
Sbjct: 320 FSRDPEAEEIEAEYAALDKREPYEGLRPQDLRRLKDMLIVETADMLQAPLFTAEALLRAH 379
Query: 396 KWDKEKLMERFYDGDQD 446
WD+EKL+E + ++
Sbjct: 380 DWDREKLLEAWMSNPEN 396
>AB037807-1|BAA92624.1| 1214|Homo sapiens KIAA1386 protein protein.
Length = 1214
Score = 34.7 bits (76), Expect = 0.25
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 219 FAMDVETHSTRERQTELEEY-PYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHF 395
F+ D E L++ PYE L +++ + I E +++ P T LL
Sbjct: 328 FSRDPEAEEIEAEYAALDKREPYEGLRPQDLRRLKDMLIVETADMLQAPLFTAEALLRAH 387
Query: 396 KWDKEKLMERFYDGDQD 446
WD+EKL+E + ++
Sbjct: 388 DWDREKLLEAWMSNPEN 404
>AY319414-1|AAP83847.1| 657|Homo sapiens outer dense fiber of sperm
tails 2 isoform 3 protein.
Length = 657
Score = 32.3 bits (70), Expect = 1.3
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +3
Query: 252 ERQTELEEYPYEVLSTEE---IVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLME 422
ER+ ELEE +E+ TE +++H ++ +KE TR+ H + +KE LM
Sbjct: 157 ERKEELEEVAHELAETEHENTVLRHNIERMKEEKDF-------TRLQKKHLQQEKECLMS 209
Query: 423 RFYDGDQD 446
+ + + D
Sbjct: 210 KLVEAEMD 217
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 31.9 bits (69), Expect = 1.7
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +3
Query: 207 DDVDFAMDVETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVV---EIPATTTR 377
DDV ++ R Q++L+ EVL E V+H+ ++E++ + E+ T
Sbjct: 820 DDVQLQFSEQSTLIRSLQSQLQNKESEVLEGAERVRHISSKVEELSQALSQKELEITKMD 879
Query: 378 ILLNHFKWDKEKLMERFYDGDQ 443
LL K D E L + + DQ
Sbjct: 880 QLLLEKKRDVETLQQTIEEKDQ 901
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
Length = 3225
Score = 31.9 bits (69), Expect = 1.7
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +3
Query: 207 DDVDFAMDVETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVV---EIPATTTR 377
DDV ++ R Q++L+ EVL E V+H+ ++E++ + E+ T
Sbjct: 786 DDVQLQFSEQSTLIRSLQSQLQNKESEVLEGAERVRHISSKVEELSQALSQKELEITKMD 845
Query: 378 ILLNHFKWDKEKLMERFYDGDQ 443
LL K D E L + + DQ
Sbjct: 846 QLLLEKKRDVETLQQTIEEKDQ 867
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,521,348
Number of Sequences: 237096
Number of extensions: 1576790
Number of successful extensions: 9658
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9651
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -