Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8c23
         (591 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132862-31|CAB70234.1|  485|Caenorhabditis elegans Hypothetical...    58   5e-09
AF003137-5|AAB93643.1|  491|Caenorhabditis elegans Hypothetical ...    50   9e-07
AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical ...    48   5e-06
AF003137-6|AAB93644.1|  497|Caenorhabditis elegans Hypothetical ...    47   9e-06
AF003137-7|AAN84856.1|  433|Caenorhabditis elegans Hypothetical ...    40   0.001
U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical pr...    35   0.050
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF098986-3|AAC67424.1|  832|Caenorhabditis elegans Hypothetical ...    29   3.3  
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z75526-6|CAD21698.1|  145|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z82083-9|CAB04975.1|  635|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z81503-6|CAB04115.1|  635|Caenorhabditis elegans Hypothetical pr...    27   7.5  

>AL132862-31|CAB70234.1|  485|Caenorhabditis elegans Hypothetical
           protein Y73F8A.34a protein.
          Length = 485

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
 Frame = +3

Query: 192 NESSGDDVDFAMDVETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATT 371
           NE++  D +F+ D++  S    +++  +  YE+L    +   M   I EV  ++++    
Sbjct: 9   NENNDLDEEFSDDMDQQSGSSGESQ-GKANYEILDPTALESDMSKTISEVQAILQVEPGI 67

Query: 372 TRILLNHFKWDKEKLMERFYD-GDQDQLFSEARVI 473
            RILL+ FKW+K++L+++FY+  D  +  +EA+VI
Sbjct: 68  CRILLHKFKWNKDRLLDKFYEHSDTTEFLAEAQVI 102


>AF003137-5|AAB93643.1|  491|Caenorhabditis elegans Hypothetical
           protein C27A12.6 protein.
          Length = 491

 Score = 50.4 bits (115), Expect = 9e-07
 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
 Frame = +3

Query: 189 GNESSGDDVDFAMDVETHSTRERQTELEEY------PYEVLSTEEIVQHMVDCIKEVNTV 350
           G+ SS DD+D     +            +Y        EVL  + +   M   I EV  V
Sbjct: 11  GSASSEDDMDDECLSDDDGIARHDQSASDYLNKKDKDNEVLDHDSLEAEMKKAISEVEAV 70

Query: 351 VEIPATTTRILLNHFKWDKEKLMERFYD-GDQDQLFSEARVINPFRKPVI 497
           +++     RILL+ +KW+KE L+ERFY+  D      +A+VI P ++ VI
Sbjct: 71  LQVKTGVCRILLHKYKWNKESLLERFYEHPDTIAFLIDAQVI-PRQQEVI 119


>AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical
           protein C27A12.8 protein.
          Length = 494

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = +3

Query: 285 EVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYD-GDQDQLFSE 461
           EVL+ + +   M   I +V  V+++     RILL+ +KW+KE L+ERFY+  D      +
Sbjct: 51  EVLNHDSLEAEMKKTITDVQAVLQVKTGVCRILLHKYKWNKESLLERFYEHPDTTTFLID 110

Query: 462 ARVI 473
           A VI
Sbjct: 111 AHVI 114


>AF003137-6|AAB93644.1|  497|Caenorhabditis elegans Hypothetical
           protein C27A12.7a protein.
          Length = 497

 Score = 47.2 bits (107), Expect = 9e-06
 Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = +3

Query: 198 SSGDDVDFAMDVETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTR 377
           S  +D +  +D   + T   + + ++   EVL  + +   M   I +V  V+++     R
Sbjct: 26  SEEEDEEIVLDTSDNDTSYAKED-KKSENEVLDNDLLEAEMNTTIADVQAVLQVDPGVCR 84

Query: 378 ILLNHFKWDKEKLMERFYD-GDQDQLFSEARVINPFRKPVI 497
           ILL+ +KW+KE L+ER Y+  D      +A+VI P ++ VI
Sbjct: 85  ILLHKYKWNKESLLERLYEHPDTIAFLIDAQVI-PRQQEVI 124


>AF003137-7|AAN84856.1|  433|Caenorhabditis elegans Hypothetical
           protein C27A12.7b protein.
          Length = 433

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +3

Query: 330 IKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYD-GDQDQLFSEARVINPFRKPVI 497
           I +V  V+++     RILL+ +KW+KE L+ER Y+  D      +A+VI P ++ VI
Sbjct: 5   IADVQAVLQVDPGVCRILLHKYKWNKESLLERLYEHPDTIAFLIDAQVI-PRQQEVI 60


>U61944-5|AAB03121.2|  482|Caenorhabditis elegans Hypothetical
           protein T12E12.1 protein.
          Length = 482

 Score = 34.7 bits (76), Expect = 0.050
 Identities = 24/87 (27%), Positives = 38/87 (43%)
 Frame = +3

Query: 210 DVDFAMDVETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLN 389
           DVD A DV    T       EE  YE LS  ++ +  +D +  + + + I     RILL 
Sbjct: 27  DVDAADDVAVTPTHS-----EEADYECLSVNQVERVFIDGVNSLVSRISINEKFARILLQ 81

Query: 390 HFKWDKEKLMERFYDGDQDQLFSEARV 470
              WD +K+  R    D++    +  +
Sbjct: 82  ANHWDVDKI-ARLVRNDRNDFLRKCHI 107


>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical
           protein T28F3.5 protein.
          Length = 1679

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 24/76 (31%), Positives = 36/76 (47%)
 Frame = +3

Query: 192 NESSGDDVDFAMDVETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATT 371
           ++  GDD   + + +TH   ER  E E+Y     S +E VQ+M   IK    V++     
Sbjct: 776 SKECGDDATLSNE-QTHELLERFLETEQYFDARDSFDESVQNM---IKSNVDVLDFENVV 831

Query: 372 TRILLNHFKWDKEKLM 419
            +I  N     KEKL+
Sbjct: 832 DQIYSNSHLRTKEKLI 847


>AF098986-3|AAC67424.1|  832|Caenorhabditis elegans Hypothetical
           protein C36C9.1 protein.
          Length = 832

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 478 HSGNLSYKGQSFPGGYQR 531
           H+GN+S+ G S P G+Q+
Sbjct: 173 HAGNVSFSGSSVPAGFQK 190


>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
           protein H20J04.2 protein.
          Length = 1427

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 485 PEWIDNSSFREQLILVSIIKTFHKLL 408
           PEWI N+ F + L +     +F +LL
Sbjct: 467 PEWISNAEFEDYLFIFQFFNSFKQLL 492


>Z75526-6|CAD21698.1|  145|Caenorhabditis elegans Hypothetical
           protein C06H2.6 protein.
          Length = 145

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = -2

Query: 485 PEWIDNSSFREQLIL--VSIIKTFHKL 411
           P  +DNS FR+QLI+  V+ I   HKL
Sbjct: 36  PSTLDNSRFRQQLIVSHVTTIPQIHKL 62


>Z82083-9|CAB04975.1|  635|Caenorhabditis elegans Hypothetical
           protein ZK1010.9 protein.
          Length = 635

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 364 AGISTTVFTSLMQSTICW 311
           AG+S T+ T++M  T+CW
Sbjct: 458 AGVSATIGTAIMCLTVCW 475


>Z81503-6|CAB04115.1|  635|Caenorhabditis elegans Hypothetical
           protein ZK1010.9 protein.
          Length = 635

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 364 AGISTTVFTSLMQSTICW 311
           AG+S T+ T++M  T+CW
Sbjct: 458 AGVSATIGTAIMCLTVCW 475


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,305,081
Number of Sequences: 27780
Number of extensions: 270676
Number of successful extensions: 735
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)