Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8c19
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   1.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.2  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   6.8  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 201 FSKGPAATLRRSSGVKARPKCWS 133
           +S GP ATL+ S+       CWS
Sbjct: 20  WSSGPNATLQSSACTDDLSSCWS 42


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 21  YKVISKRFSGVIFNKKQECRCYHISSMILAL 113
           Y+++S   SG+ F      +CY  + ++L L
Sbjct: 162 YQILS-HLSGIFFTVFNVAQCYLTTELVLML 191


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 537 ERCPSHRPVPFARRSR 584
           ERC   RP+P  +++R
Sbjct: 183 ERCDPDRPLPLDQKAR 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,438
Number of Sequences: 336
Number of extensions: 3023
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)