Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8c19
(664 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 29 0.79
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 27 2.4
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 27 3.2
SPAC31G5.10 |eta2||Myb family transcriptional regulator Eta2|Sch... 27 3.2
SPBC17G9.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 4.2
SPAC3G9.09c |tif211||translation initiation factor eIF2 alpha su... 26 4.2
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 26 4.2
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 26 5.6
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 26 5.6
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 25 7.4
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 25 9.7
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 28.7 bits (61), Expect = 0.79
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -2
Query: 561 PVCAMGTFLSPLTASGTFLGAVMVSTP-SDDSRDSTVSGAAP 439
P + FL+P+T SGTF + + P S R +T S A P
Sbjct: 384 PATSASPFLTPVTTSGTFNYSFNATNPQSILQRPATTSSAVP 425
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 194 LLNREYYRPWRHLAAAARDVGSSIKVDKDKFQV 292
LLN Y + W+ L++ + + S DKD Q+
Sbjct: 358 LLNGRYKKRWQQLSSEVKKISDSASSDKDVKQL 390
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 26.6 bits (56), Expect = 3.2
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 625 PFYFSFSLASXTLILDLLANGTGLCDGHL 539
PF+F L L+LD ANG GHL
Sbjct: 643 PFHFRIHLLQQLLLLDKQANGYAQPFGHL 671
>SPAC31G5.10 |eta2||Myb family transcriptional regulator
Eta2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +1
Query: 520 RRQGREKGAHRTDRSRSQGDQGSEXKKPTRRKS---RKVY--EELRLLQN 654
R+Q + A + R + DQG + KK ++KS RK Y + L+LL++
Sbjct: 452 RKQYEKTIASYSSNQRQEEDQGKKRKKRKKKKSKGKRKFYVADSLKLLEH 501
>SPBC17G9.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 317
Score = 26.2 bits (55), Expect = 4.2
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +2
Query: 20 IQSYIQAIFGSNLQ*KARMSLLP-YFFDDFGSRRPRRLLDQHFGLALTPDDLLSVAAGPL 196
I S + A+F N++ A++ LP FD + R + D+LL A PL
Sbjct: 168 ISSLLSAVFEINME-NAKIRHLPSVIFDGLIEKNKDRPYHINLSCKRAYDELLPRIAVPL 226
Query: 197 LNREYY 214
L EY+
Sbjct: 227 LPHEYH 232
>SPAC3G9.09c |tif211||translation initiation factor eIF2 alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 306
Score = 26.2 bits (55), Expect = 4.2
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = +2
Query: 224 RHLAAAARDVGSSIKVDKDKFQVNLDVQHFAPEEI 328
+H+ +V ++VDK+K ++L + +PE++
Sbjct: 61 KHIRVGRNEVVVVLRVDKEKGYIDLSKRRVSPEDV 95
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 26.2 bits (55), Expect = 4.2
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -2
Query: 543 TFLSPLTASGTFLGAVMVSTPSDDS-RDSTVSGAAP 439
+F+S +TA T GAV+V P+ + ++ VSG+ P
Sbjct: 783 SFMSTITAHDTSSGAVIVVEPTAGTVTETIVSGSIP 818
>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 440 GAAPETVESRLSSDGVLTITAPRKVPD 520
G P T+ES ++ D L I RK+ D
Sbjct: 452 GTDPSTLESDIAEDAALQIDEVRKISD 478
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 495 SLRRGRCLTPSRERERCPSHRPVPFARRS 581
S RR R P R R R S RP P A +
Sbjct: 198 SRRRSRSRRPGRSRSRRRSRRPSPSAEHN 226
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 217 SVVFPVQQRPGSDTKKIIWC*GKAKMLVQQ 128
+ VF + Q PG+D I C G ++LV +
Sbjct: 661 TAVFAIMQNPGNDWDMIRACIGSKEILVPE 690
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 17 NIQSYIQAIFGSNLQ*KARMSLLPYFFDDFGSRRPRRLLDQHFGL 151
N S I A+ L ++M PY F +RL+ +H GL
Sbjct: 972 NRDSEIAAVIRDTLTIDSKMDGKPYKVGKFAHTLRKRLMREHLGL 1016
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,541,013
Number of Sequences: 5004
Number of extensions: 47887
Number of successful extensions: 137
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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