Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8c19
(664 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0485 - 8808139-8808618 39 0.004
03_02_0484 + 8805053-8805538 39 0.004
03_02_0483 - 8804021-8804485 39 0.004
03_02_0478 + 8775892-8776377 37 0.012
02_02_0077 - 6586638-6587165 37 0.012
04_04_0017 + 22176759-22177406 36 0.022
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 36 0.038
01_01_0229 - 1943473-1943922 35 0.050
01_01_0231 + 1951047-1951499 35 0.066
11_02_0041 - 7669692-7670312 34 0.12
02_05_0494 + 29486960-29487454 33 0.15
01_01_0227 + 1933247-1933699 33 0.27
10_08_0736 + 20205934-20206551,20207258-20207426,20207562-202076... 32 0.47
01_01_0599 - 4448290-4448790 31 0.62
02_05_1020 - 33561454-33561568,33561839-33562070,33563286-335633... 31 1.1
06_01_0318 - 2284481-2284594,2285340-2286044,2286589-2286609,228... 30 1.4
06_01_0613 + 4439829-4439917,4440650-4440738,4441219-4441453,444... 29 2.5
05_06_0034 + 25082875-25084113 29 4.4
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 29 4.4
01_01_0228 + 1940149-1940649 29 4.4
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 28 5.8
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 28 5.8
>03_02_0485 - 8808139-8808618
Length = 159
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 404 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 517
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 111 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 147
>03_02_0484 + 8805053-8805538
Length = 161
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 404 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 517
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 113 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 404 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 517
S +F+RR+ LPE PE +++ + +GVLT+T P++ P
Sbjct: 106 SGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEP 142
>03_02_0478 + 8775892-8776377
Length = 161
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = +2
Query: 404 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 511
S +F+RR+ LP+ A PE +++ + +GVLT+T P++
Sbjct: 113 SGKFLRRFRLPDNAKPEQIKASM-ENGVLTVTVPKE 147
>02_02_0077 - 6586638-6587165
Length = 175
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 410 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 562
+F+RR+ LPE A + V + DGVLT+T +K P K R V + G
Sbjct: 117 KFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>04_04_0017 + 22176759-22177406
Length = 215
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +2
Query: 410 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPIAQTG 562
+F R+ LP+ A +++ + L + GVLT+ + PD +KG R V IA G
Sbjct: 141 RFWRQLRLPDNADLDSIAASLDN-GVLTVRFRKLAPDQIKGPRVVGIASAG 190
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 404 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 508
S QF+RR+ LPE A + V++ L +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPK 135
>01_01_0229 - 1943473-1943922
Length = 149
Score = 35.1 bits (77), Expect = 0.050
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 404 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 508
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 101 SGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPK 134
>01_01_0231 + 1951047-1951499
Length = 150
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 404 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPR 508
S QF+RR+ LPE A + V++ + +GVLT+T P+
Sbjct: 102 SGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPK 135
>11_02_0041 - 7669692-7670312
Length = 206
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 410 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVP 517
+F RR+ +P GA V +RL DGVLT+T P KVP
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVP-KVP 174
>02_05_0494 + 29486960-29487454
Length = 164
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +2
Query: 407 RQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 511
R V ++ LPE AA + +R++ DGVLT+T P++
Sbjct: 106 RAAVTQFRLPEDAAADEASARMA-DGVLTVTVPKR 139
>01_01_0227 + 1933247-1933699
Length = 150
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 404 SRQFVRRYALPEGAAPETVESRLSSDGVLTITAPRK 511
S +F RR+ LP GA + V + + +GVLT+T P++
Sbjct: 102 SGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKE 136
>10_08_0736 +
20205934-20206551,20207258-20207426,20207562-20207692,
20208100-20208144,20208145-20208939,20209081-20209128,
20209504-20209620,20210087-20210161
Length = 665
Score = 31.9 bits (69), Expect = 0.47
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +1
Query: 478 RRGTHHHCAEEGA*RRQGREKGAHRTDRSRSQGDQGSEXKKPTRRKSRKVYEELRLLQNG 657
RR H + + + Q RE R++ RS+ + + K+P RRKS++ +EL G
Sbjct: 411 RRAISHSEEPQASGQSQNRENVVPRSEGRRSRSGKKGK-KRPARRKSQQKRDELLSTLEG 469
Query: 658 GA 663
G+
Sbjct: 470 GS 471
>01_01_0599 - 4448290-4448790
Length = 166
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +2
Query: 410 QFVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGERKVPI 550
+F+R++ LP+ A + + S + DGVLT+T + P K + + +
Sbjct: 118 KFMRKFVLPDNADVDKI-SAVCQDGVLTVTVEKLPPPEPKKPKTIEV 163
>02_05_1020 -
33561454-33561568,33561839-33562070,33563286-33563374,
33563856-33563944
Length = 174
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +3
Query: 348 GTS*WKASTKRRKTSTGIFQGSSSDVTRCLKARRLRLWNRDCHQTGYSPSLRRGRCLTPS 527
G + W+ R +S G +C + + R+C L G+ + S
Sbjct: 60 GKNGWRVELSRNSSSRGGRDRHGGSEMKCYECGETGHFARECRLRIGPGGLGSGKRRSRS 119
Query: 528 RERERCPSHRPVP-FARRS 581
R R R P +R P + RRS
Sbjct: 120 RSRSRSPQYRKSPTYGRRS 138
>06_01_0318 -
2284481-2284594,2285340-2286044,2286589-2286609,
2287186-2287257,2287762-2287842,2288059-2288133,
2288197-2288484
Length = 451
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +3
Query: 411 SSSDVTRCLKARRLRLWNRDCHQTGYSPSLRRGRCLTPSRERERCPSHRPVPFAR 575
SS +V R + RR +RD + G S S RR R +P+R R +HR PF R
Sbjct: 328 SSRNVDRQGRERR----DRDSDRHGRS-SARRSRSRSPNRGRTEGENHRSSPFGR 377
>06_01_0613 +
4439829-4439917,4440650-4440738,4441219-4441453,
4441768-4441771,4441829-4441930
Length = 172
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = +3
Query: 348 GTS*WKASTKRRKTS-TGIFQGSSSDVTRCLKARRLRLWNRDCHQTGYSPSLRRGRCLTP 524
G + W+ R +S G S ++C + + R+C S L GR +
Sbjct: 60 GKNGWRVELSRNASSGRGGRDRYGSSESKCYECGETGHFARECRLRIGSGGLGSGRRRSR 119
Query: 525 SRERERCPSHRPVP-FARRSRIRVXEAN 605
SR R R P +R P + RR I + N
Sbjct: 120 SRSRSRSPRYRRSPSYGRRIYIYTKKNN 147
>05_06_0034 + 25082875-25084113
Length = 412
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -2
Query: 561 PVCAMGTFLSPLTASGTFLGAVMVSTPSDDSRDSTVSGAAP 439
P+ A+G LSP S + L A + S+PS S S+ S P
Sbjct: 129 PIQALGQILSPAN-SASVLAASVTSSPSSSSSSSSSSPPLP 168
>01_02_0042 -
10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 469 TVIRRGTHHHCAE--EGA*RRQGREKGAHRTDRSRSQGDQGSEXKK 600
T++ +G HH + EGA + + + A+R D+S +GD G+ K
Sbjct: 607 TLVEKGPHHELLKDPEGAYSQLIKLQEANRQDKSDRKGDSGARSGK 652
>01_01_0228 + 1940149-1940649
Length = 166
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 413 FVRRYALPEGAAPETVESRLSSDGVLTITAPRKVPDAVKGER 538
+V R LP G E V + VL IT R V KG+R
Sbjct: 52 YVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQR 93
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 520 RRQGREKGAHRTDRSRSQG-DQGSEXKKPTRRKSR 621
RR+ R++ HR RSRS+ +G + + +R +SR
Sbjct: 135 RRRDRDRDGHRRHRSRSRSPSKGRDRRSRSRSRSR 169
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 520 RRQGREKGAHRTDRSRSQGDQGSEXKKPTRRKSRKVY 630
RR+ +K HR+ + +S+ + + T+RKS++ Y
Sbjct: 220 RRKSSKKDKHRSAKGKSKHKKTKRKSRGTKRKSKRSY 256
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,561,593
Number of Sequences: 37544
Number of extensions: 360595
Number of successful extensions: 1157
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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