Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8c18
         (543 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D8EB09 Cluster: Cysteine-rich BMP regulator 2.; ...    33   5.6  
UniRef50_Q83GA5 Cluster: ABC transporter ATP-binding protein; n=...    32   7.4  
UniRef50_Q74EC7 Cluster: Sensor protein; n=2; Geobacter|Rep: Sen...    32   9.8  
UniRef50_A4FG97 Cluster: Assimilatory nitrite reductase large su...    32   9.8  
UniRef50_Q9Y0W2 Cluster: Beta 1,4-endoglucanase; n=17; Coelomata...    32   9.8  
UniRef50_Q7JVI3 Cluster: LD23767p; n=8; Endopterygota|Rep: LD237...    32   9.8  
UniRef50_Q381I7 Cluster: Putative uncharacterized protein; n=1; ...    32   9.8  

>UniRef50_UPI0000D8EB09 Cluster: Cysteine-rich BMP regulator 2.;
           n=3; Danio rerio|Rep: Cysteine-rich BMP regulator 2. -
           Danio rerio
          Length = 658

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -3

Query: 496 QKCTG--FSISNNKPDRGLRNSSSETDVTQFLRDVIVVQL*LDWL 368
           Q C G  FS+  +  DRG +  S   +VT F+ DV V+QL  DW+
Sbjct: 354 QDCEGGDFSVHVSNEDRGRKGVSWTKEVTVFIGDV-VIQLYQDWI 397


>UniRef50_Q83GA5 Cluster: ABC transporter ATP-binding protein; n=2;
           Tropheryma whipplei|Rep: ABC transporter ATP-binding
           protein - Tropheryma whipplei (strain Twist) (Whipple's
           bacillus)
          Length = 515

 Score = 32.3 bits (70), Expect = 7.4
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 256 CRYHKRGRREFACRSNQDACSSGSPAGSF 342
           C +  RGR +++C  N+D  +  SP GSF
Sbjct: 333 CMHDSRGRCQYSCGMNRDILTHTSPCGSF 361


>UniRef50_Q74EC7 Cluster: Sensor protein; n=2; Geobacter|Rep: Sensor
           protein - Geobacter sulfurreducens
          Length = 579

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 290 HAAQIKMRALLVALLGVS-MSACAFASQPVELELDDDDVTQKLSNVSFARRI 442
           HAA ++M  L+ ALL +S MS  A   +PV+L     ++  +L N    RR+
Sbjct: 397 HAAGVRMGELIDALLNLSRMSRDALRRRPVDLAALAGEILDELKNAEPERRV 448


>UniRef50_A4FG97 Cluster: Assimilatory nitrite reductase large
           subunit; n=2; Saccharopolyspora erythraea NRRL 2338|Rep:
           Assimilatory nitrite reductase large subunit -
           Saccharopolyspora erythraea (strain NRRL 23338)
          Length = 460

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +2

Query: 236 RQRHENHVDTINAVGENSHAAQIKMRALLVALLGVSMSACAFASQPVELEL 388
           R RH  H   I  +G  SHAA    R LL ++L  S++A   A  P++ ++
Sbjct: 19  RMRHHGHSGPITVLGAESHAAY--NRVLLGSVLDGSLTADGIALPPLDADV 67


>UniRef50_Q9Y0W2 Cluster: Beta 1,4-endoglucanase; n=17;
           Coelomata|Rep: Beta 1,4-endoglucanase - Cherax
           quadricarinatus (Australian red claw crayfish)
          Length = 469

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 21/54 (38%), Positives = 28/54 (51%)
 Frame = +2

Query: 179 SYYLNSKMNSDSNFILNQIRQRHENHVDTINAVGENSHAAQIKMRALLVALLGV 340
           S Y N+ +N   NF+ NQ     E  V  ++A G N HAA +   AL  A LG+
Sbjct: 307 SEYTNA-LNQFLNFVRNQAPYTPEGLV-FLDAWGSNRHAANVAFIALYAAKLGI 358


>UniRef50_Q7JVI3 Cluster: LD23767p; n=8; Endopterygota|Rep: LD23767p
           - Drosophila melanogaster (Fruit fly)
          Length = 387

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = +2

Query: 239 QRHENHVDTINAVGENSHAAQIKMRALLVALLGVSMSACAFASQPVELELDDDDV 403
           Q +E+H + +N+ G N      KMR L    L  S     F +   EL++++D+V
Sbjct: 255 QFYEDHREFVNSQGLNHEQNMKKMRLLTFMQLAESSPEMTFETLTKELQINEDEV 309


>UniRef50_Q381I7 Cluster: Putative uncharacterized protein; n=1;
            Trypanosoma brucei|Rep: Putative uncharacterized protein
            - Trypanosoma brucei
          Length = 1001

 Score = 31.9 bits (69), Expect = 9.8
 Identities = 21/90 (23%), Positives = 42/90 (46%)
 Frame = +2

Query: 260  DTINAVGENSHAAQIKMRALLVALLGVSMSACAFASQPVELELDDDDVTQKLSNVSFARR 439
            +  +AVG  + +  +  +A        ++S C   ++  +LE   +DV +  S +S  R 
Sbjct: 819  EMFSAVGGQAGSVVLSTKAAFAPPHTATLSICPLQNEEQQLE---EDVARAASRISALRH 875

Query: 440  ITKPTIRLVIGNGKSSAFLTAVTSLLLLIA 529
              +P   +V GN +S +   AV +  + +A
Sbjct: 876  EGRPLDIIVFGNSQSRSSANAVPASSVSVA 905


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,518,255
Number of Sequences: 1657284
Number of extensions: 9556572
Number of successful extensions: 26697
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26694
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)