Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8c18
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.57 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   3.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   3.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   4.0  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 439  NYEAHDPACYWKWKIQCI 492
            +Y   +  C WK+K++C+
Sbjct: 1239 HYNPEEHMCDWKYKVKCV 1256


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 405 RKN*VTSVSLEELRSPRSGLLLEM 476
           RK  V++VSL  L++ RSG  L++
Sbjct: 17  RKCTVSNVSLHSLKNKRSGASLQV 40


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 176 LSYYLNSKMNSDSNFILNQIRQRHENHVDT 265
           + YY N+  N D N+I  ++     N + T
Sbjct: 435 VGYYENNHYNGDPNYISPEVFPNTNNAIMT 464


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 176 LSYYLNSKMNSDSNFILNQIRQRHENHVDT 265
           + YY N+  N D N+I  ++     N + T
Sbjct: 383 VGYYENNHYNGDPNYISPEVFPNTNNAIMT 412


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +1

Query: 487 CISDGSDILAFTYRCD 534
           C+SDGS +++   +C+
Sbjct: 461 CVSDGSKLVSIQRKCN 476


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +2

Query: 257 VDTINAVGENSHAAQIKMRALLVALLGVSMS 349
           VD IN +  + H A      L   L G SMS
Sbjct: 194 VDFINIMSYDYHTADQPQTGLNAPLYGNSMS 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,590
Number of Sequences: 336
Number of extensions: 2569
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)