Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8c18
         (543 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    27   0.30 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    26   0.92 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.5  

>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 27.5 bits (58), Expect = 0.30
 Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
 Frame = +2

Query: 218 FILNQIRQRHENHVDTINAVGEN--SHAAQIKMRALLVALLGVSMSACAFASQPVELELD 391
           F   +++Q     ++    +G++  +H  Q++M+ +L       +  CAF  +   L   
Sbjct: 141 FTSGKMKQMFATVLEVAERLGQHVATHTGQMEMKDVLARYTTDVIGTCAFGIECNTLRNP 200

Query: 392 DDDVTQKLSNVSFARRITK--PTIRLVIGNGKSSAFLTAVT 508
           D D   K  N  F ++++     I +++G   SS F   +T
Sbjct: 201 DSDFL-KYGNKVFEQKVSTMIKIILVLMGRKISSKFTLKIT 240


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 25.8 bits (54), Expect = 0.92
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = +1

Query: 76   LKSYIRKCIQFFDTDAVHRAVYLSIAPINTNQSFVV 183
            LK  +  C +FFD   +HR  Y  +  +   +  ++
Sbjct: 1247 LKRIVAYCHRFFDRKRIHRKSYFELRELKRAEKTII 1282


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 469  NNKPDRGLRNSSSETDVTQFLRDV 398
            N + D  +R S++  D+TQ +RD+
Sbjct: 944  NRERDELIRYSTALRDLTQMMRDI 967


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,985
Number of Sequences: 2352
Number of extensions: 9507
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)