Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8c17
(269 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 72 3e-12
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 62 2e-09
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 55 4e-07
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 54 8e-07
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 51 6e-06
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 47 9e-05
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 45 4e-04
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 38 0.033
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 38 0.044
UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S riboso... 34 0.54
UniRef50_Q8Y3Q8 Cluster: Lmo2775 protein; n=5; Listeria|Rep: Lmo... 33 1.2
UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ sp|P6... 31 6.6
UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87; Eukary... 31 6.6
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 71.7 bits (168), Expect = 3e-12
Identities = 40/76 (52%), Positives = 45/76 (59%)
Frame = +2
Query: 41 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 220
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 221 YHQKMKVNLRNHYKKK 268
+Q K NLR YK K
Sbjct: 61 INQTQKENLRKFYKGK 76
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 62.1 bits (144), Expect = 2e-09
Identities = 35/73 (47%), Positives = 40/73 (54%)
Frame = +2
Query: 41 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 220
M K+KC LR + LRV+KVTGG ASKLSKIRVVRK IAR+ V
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 221 YHQKMKVNLRNHY 259
+Q K LR Y
Sbjct: 61 INQTQKQELRKFY 73
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 54.8 bits (126), Expect = 4e-07
Identities = 31/73 (42%), Positives = 39/73 (53%)
Frame = +2
Query: 50 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 229
VK EL++K NLRV KV GG +SK+ +I +RK IARV V +Q
Sbjct: 77 VKTFELQSKSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQ 136
Query: 230 KMKVNLRNHYKKK 268
K + NLR YK K
Sbjct: 137 KQRANLREFYKGK 149
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 53.6 bits (123), Expect = 8e-07
Identities = 30/73 (41%), Positives = 38/73 (52%)
Frame = +2
Query: 47 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 226
K++ ELR K RV+KVT SKLSKI +VRKA+A+V VY+
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 227 QKMKVNLRNHYKK 265
Q+ K R YKK
Sbjct: 82 QRKKEEARKKYKK 94
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 50.8 bits (116), Expect = 6e-06
Identities = 32/76 (42%), Positives = 38/76 (50%)
Frame = +2
Query: 41 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 220
M VK ELRT + LR++K G A K SKI VRK +ARV V
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 221 YHQKMKVNLRNHYKKK 268
Y+QK K+ LR YK K
Sbjct: 60 YNQKRKMELRQLYKNK 75
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 46.8 bits (106), Expect = 9e-05
Identities = 27/79 (34%), Positives = 36/79 (45%)
Frame = +2
Query: 32 TVKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARV 211
T+ KVK +L K + LRV K+ G +SK +I VRK+IARV
Sbjct: 61 TMSTSKVKAGQLWGKSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRIHDVRKSIARV 120
Query: 212 YIVYHQKMKVNLRNHYKKK 268
V + + LR YK K
Sbjct: 121 LTVINANQRAQLRLFYKNK 139
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 44.8 bits (101), Expect = 4e-04
Identities = 23/70 (32%), Positives = 36/70 (51%)
Frame = +2
Query: 50 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 229
+K +LR K + LRV + TGG ++L +IR +RK+IAR+ V +Q
Sbjct: 5 MKIKDLREKSKDDLLKTLTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQ 64
Query: 230 KMKVNLRNHY 259
+ NL+ Y
Sbjct: 65 NERSNLKMFY 74
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 38.3 bits (85), Expect = 0.033
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +2
Query: 29 VTVKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIAR 208
VTV M ++K LR ++ + LRVA+VTGG +KLS I+ VR A+
Sbjct: 104 VTVAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALRE 162
Query: 209 VY 214
Y
Sbjct: 163 AY 164
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 37.9 bits (84), Expect = 0.044
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 128 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHY 259
+LRV + TG +KLS+I VVRK IAR+ + Q+ +LR +
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKH 76
>UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Bos taurus|Rep: PREDICTED: similar to
60S ribosomal protein L35 - Bos taurus
Length = 98
Score = 34.3 bits (75), Expect = 0.54
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 131 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNH 256
L + K+T V+SK SKI V K I+R+ V +Q K NLR +
Sbjct: 17 LGIIKMTSSVSSKPSKILGVCKFISRLLTVVNQTQKENLRKY 58
>UniRef50_Q8Y3Q8 Cluster: Lmo2775 protein; n=5; Listeria|Rep:
Lmo2775 protein - Listeria monocytogenes
Length = 722
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -2
Query: 259 VVVSKIDLHLLVIHNVNTCDSFSYNTDLGQFRSNSTSNFSNP 134
V +SK DL + +I+ N D FSY+++ G FR T N ++P
Sbjct: 504 VALSKEDLRVNIIYAENNQDYFSYDSNTGDFR---TGNITDP 542
>UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
gb|AAF40528.1| dna; n=2; Ostreococcus|Rep: DNAJ_NEIMB
Chaperone protein dnaJ sp|P63968|DNAJ_NEIMA Chaperone
protein dnaJ gb|AAF40528.1| dna - Ostreococcus tauri
Length = 575
Score = 30.7 bits (66), Expect = 6.6
Identities = 18/32 (56%), Positives = 19/32 (59%)
Frame = -3
Query: 228 W*YTM*TRAIAFLTTRILDSLEATPPVTLATR 133
W T+ AIA T IL SL PPVTLATR
Sbjct: 454 WRITVRVCAIANRTCLILLSLPGAPPVTLATR 485
>UniRef50_P40213 Cluster: 40S ribosomal protein S16; n=87;
Eukaryota|Rep: 40S ribosomal protein S16 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 143
Score = 30.7 bits (66), Expect = 6.6
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 128 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQK-MKVNLRNHYKK 265
++RV +VTGG +S++ +R+AIA+ + YHQK + +N KK
Sbjct: 64 DIRV-RVTGG--GHVSQVYAIRQAIAKGLVAYHQKYVDEQSKNELKK 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,416,658
Number of Sequences: 1657284
Number of extensions: 2636295
Number of successful extensions: 6026
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6023
length of database: 575,637,011
effective HSP length: 67
effective length of database: 464,598,983
effective search space used: 10221177626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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