Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8c17
         (269 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   1.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   2.4  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   3.1  
U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.           20   4.1  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 1.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 128 LLILSLAPQAV*IAPFYLLSLILNTSLCPF 39
           LLIL      + + P+YLL  + N    PF
Sbjct: 272 LLILFSCLLHLVVTPYYLLIEVCNAGYLPF 301


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 92  IAPFYLLSLILNTSLCPF 39
           + PFY+++ +  TS C F
Sbjct: 234 LIPFYVVATLGTTSSCTF 251


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +2

Query: 161 ASKLSKIRVVRKAIARVYIVYH 226
           + KLSKI+ ++ A   +  +YH
Sbjct: 128 SDKLSKIQTLKLAARYIDFLYH 149


>U61152-1|AAB41307.1|   45|Tribolium castaneum TATH2 protein.
          Length = 45

 Score = 20.2 bits (40), Expect = 4.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 22 RERDRQNGQSEVF 60
          RER R NG +E F
Sbjct: 5  RERRRMNGLNEAF 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,609
Number of Sequences: 336
Number of extensions: 713
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  4485306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)