Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8c15
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    24   0.97 
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    24   0.97 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    24   1.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.8  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   6.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   6.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.0  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 361 WTLYAPDHSVRSSVRTTLSLGNRVL-ATTGLR 453
           WT+Y PD+   +++ T  +L   +L A  GLR
Sbjct: 31  WTIYRPDNGKFTALDTDPNLCTHILYAFVGLR 62


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 361 WTLYAPDHSVRSSVRTTLSLGNRVL-ATTGLR 453
           WT+Y PD+   +++ T  +L   +L A  GLR
Sbjct: 31  WTIYRPDNGKFTALDTDPNLCTHILYAFVGLR 62


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 335 DSPRHVLSSSRLVIVHVDALQLEVG 261
           D+P  +    R++I HVDA  L+ G
Sbjct: 486 DTPDLISDGYRVIISHVDAWYLDCG 510


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 183  NQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEA 305
            N+I  + W V  D  G      YHGD  +  E I    ++A
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKA 951


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -3

Query: 416 DKVVRTEDLTEWSGAYRVHCPGL*VHKDSPRH 321
           DK+   ED+T   G  ++    + +  D+P H
Sbjct: 278 DKIYHPEDITNLLGYAKLRGVRIIIEIDAPSH 309


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 542 PVDSLTWRRNW 574
           P + LTWRRN+
Sbjct: 592 PREQLTWRRNF 602


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 542 PVDSLTWRRNW 574
           P + LTWRRN+
Sbjct: 484 PREQLTWRRNF 494


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -1

Query: 277 SSWRSESP*YVPVGSMPCSSDITSQNL 197
           SSW    P   PVG    +S +  Q L
Sbjct: 35  SSWPGRPPKRAPVGLSLAASHLQQQQL 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,426
Number of Sequences: 336
Number of extensions: 3271
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)