Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8c13
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF077536-10|AAK31408.2|  229|Caenorhabditis elegans Hypothetical...    31   0.93 
U55363-10|AAL11103.1|  364|Caenorhabditis elegans Hypothetical p...    29   2.1  
Z81494-4|CAB04050.2|  319|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z81074-9|CAB03040.1|  223|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z95559-17|CAL44975.1|  331|Caenorhabditis elegans Hypothetical p...    28   6.6  
Z69659-1|CAA93483.1|  329|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr...    27   8.7  
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.      27   8.7  
AF016681-9|AAB66172.2|  225|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AF077536-10|AAK31408.2|  229|Caenorhabditis elegans Hypothetical
           protein C16A11.7 protein.
          Length = 229

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 20/59 (33%), Positives = 32/59 (54%)
 Frame = -1

Query: 586 SPDLGSRESSSHRLAVVSGTRIVSKPNTSLDSLTSQNVLVAFLVISVLSGSRAPSITSR 410
           SP++GSR S SH+L +  G+ + S+PN    + T     +A     VL+   A ++T R
Sbjct: 70  SPNVGSRTSDSHQLTL--GSDLRSEPNNLNIAATLAEPNIAEHFKGVLTKKEAANLTRR 126


>U55363-10|AAL11103.1|  364|Caenorhabditis elegans Hypothetical
           protein ZC404.13 protein.
          Length = 364

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 235 KLLMKNEADKAINYMTVYLEQISLYFQVIIH 327
           +LL++N +D   +Y+T Y + I  YFQ+  H
Sbjct: 95  QLLLRNFSDYYSSYITAYAQLIVDYFQIAFH 125


>Z81494-4|CAB04050.2|  319|Caenorhabditis elegans Hypothetical
           protein F02E9.3 protein.
          Length = 319

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +3

Query: 417 VMLGARLPESTEITRKATSTF*DVRESKEVFGFETIRVPETTASRWELLSREPRSGEDCV 596
           V  GAR  ++ E TRKA   F  + + +E     + R      SR    SR P   ED  
Sbjct: 190 VFPGARSEKTRETTRKAARAFARMEKEREDANNSSSR------SRKTYQSRSPTGSEDSS 243

Query: 597 PV*NIT-VSGG 626
           PV  +T VS G
Sbjct: 244 PVIKLTRVSSG 254


>Z81074-9|CAB03040.1|  223|Caenorhabditis elegans Hypothetical
           protein F32B6.4 protein.
          Length = 223

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = -1

Query: 586 SPDLGSRESSSHRLAVVSGTRIVSKPNTSLDSLTSQNVLVAFLVISVLSGSRAPSITSRS 407
           SP +GSR S SH L + S +R VS  N ++ +  ++  L   L   VL    A  +TS S
Sbjct: 64  SPSMGSRVSDSHLLTLGSDSRSVSN-NLNIAATMAEPNLEEHLK-GVLHKKEAAKLTSPS 121


>Z95559-17|CAL44975.1|  331|Caenorhabditis elegans Hypothetical
           protein Y41E3.19 protein.
          Length = 331

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 286 YLEQISLYFQVIIHDRKPRNGTYCKESIVKLLGENLQLADENVTLCLALG 435
           YL + SLYF VII   K +     K+    LL  ++    + +TL L +G
Sbjct: 270 YLPKCSLYFAVIISSEKAKIRRVKKKFWPSLLLMDIPKLGDRITLVLDMG 319


>Z69659-1|CAA93483.1|  329|Caenorhabditis elegans Hypothetical
           protein F07C6.1 protein.
          Length = 329

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 325 HDRKPRNG-TYCKESIVKLLGENLQLADENV 414
           H+   +NG  YC++  ++L+G +  + D NV
Sbjct: 240 HEHYEKNGKAYCRDDFLELIGHHCFICDRNV 270


>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
            C52A11.4f protein.
          Length = 2371

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 436  SRAPSITSRSRRPIAGSLRGV*RYSPCST 350
            SR+PS  +RS R I GS   +  +SPCST
Sbjct: 944  SRSPS-AARSERSIEGSEFSMTSWSPCST 971


>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
            C52A11.4a protein.
          Length = 2393

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 436  SRAPSITSRSRRPIAGSLRGV*RYSPCST 350
            SR+PS  +RS R I GS   +  +SPCST
Sbjct: 966  SRSPS-AARSERSIEGSEFSMTSWSPCST 993


>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical
           protein C52A11.4e protein.
          Length = 2184

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 436 SRAPSITSRSRRPIAGSLRGV*RYSPCST 350
           SR+PS  +RS R I GS   +  +SPCST
Sbjct: 757 SRSPS-AARSERSIEGSEFSMTSWSPCST 784


>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
            C52A11.4d protein.
          Length = 2491

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 436  SRAPSITSRSRRPIAGSLRGV*RYSPCST 350
            SR+PS  +RS R I GS   +  +SPCST
Sbjct: 1064 SRSPS-AARSERSIEGSEFSMTSWSPCST 1091


>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
            C52A11.4f protein.
          Length = 2371

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 436  SRAPSITSRSRRPIAGSLRGV*RYSPCST 350
            SR+PS  +RS R I GS   +  +SPCST
Sbjct: 944  SRSPS-AARSERSIEGSEFSMTSWSPCST 971


>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
            C52A11.4a protein.
          Length = 2393

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 436  SRAPSITSRSRRPIAGSLRGV*RYSPCST 350
            SR+PS  +RS R I GS   +  +SPCST
Sbjct: 966  SRSPS-AARSERSIEGSEFSMTSWSPCST 993


>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical
           protein C52A11.4e protein.
          Length = 2184

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 436 SRAPSITSRSRRPIAGSLRGV*RYSPCST 350
           SR+PS  +RS R I GS   +  +SPCST
Sbjct: 757 SRSPS-AARSERSIEGSEFSMTSWSPCST 784


>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
            C52A11.4d protein.
          Length = 2491

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 436  SRAPSITSRSRRPIAGSLRGV*RYSPCST 350
            SR+PS  +RS R I GS   +  +SPCST
Sbjct: 1064 SRSPS-AARSERSIEGSEFSMTSWSPCST 1091


>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical
           protein C52A11.4c protein.
          Length = 2202

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 436 SRAPSITSRSRRPIAGSLRGV*RYSPCST 350
           SR+PS  +RS R I GS   +  +SPCST
Sbjct: 775 SRSPS-AARSERSIEGSEFSMTSWSPCST 802


>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
          Length = 2166

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -1

Query: 436 SRAPSITSRSRRPIAGSLRGV*RYSPCST 350
           SR+PS  +RS R I GS   +  +SPCST
Sbjct: 735 SRSPS-AARSERSIEGSEFSMTSWSPCST 762


>AF016681-9|AAB66172.2|  225|Caenorhabditis elegans Hypothetical
           protein F22E5.6 protein.
          Length = 225

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 160 DNHLLGYPGNLSSAD*RRKAQIKAQIRSVSSPFQTSH 50
           DN ++  P N    D   K Q K  I    SP++T+H
Sbjct: 136 DNRIVHVPNNFEFLDFLEKHQGKLDIYFKESPYETTH 172


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,817,090
Number of Sequences: 27780
Number of extensions: 309509
Number of successful extensions: 980
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)