Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8c12
(607 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-880|AAF52218.2| 630|Drosophila melanogaster CG31651-PA... 63 2e-10
AE014134-879|ABI31292.1| 630|Drosophila melanogaster CG31651-PB... 63 2e-10
AY268066-1|AAQ56702.1| 617|Drosophila melanogaster UDP-GalNAc:p... 56 3e-08
D43795-1|BAA07853.1| 519|Drosophila melanogaster CP-1 protein. 29 6.5
BT004902-1|AAO47880.1| 746|Drosophila melanogaster LD08432p pro... 29 6.5
AE014297-2133|AAF55262.2| 746|Drosophila melanogaster CG10278-P... 29 6.5
AB124838-1|BAD00020.1| 746|Drosophila melanogaster transcriptio... 29 6.5
AB054996-1|BAB21551.1| 571|Drosophila melanogaster dGATAe protein. 29 6.5
AB054995-1|BAB21550.1| 704|Drosophila melanogaster GATA factor ... 29 6.5
>AE014134-880|AAF52218.2| 630|Drosophila melanogaster CG31651-PA,
isoform A protein.
Length = 630
Score = 63.3 bits (147), Expect = 2e-10
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +2
Query: 230 VTRGVFVKMFRSKIRIHTCRIILLTSLAWLLVDVMLLAMYSDCFG-DG--CNQK-TVTSE 397
+T F + R ++R +TCRI+LLTSL W++ D +L+A YSDC G DG C + E
Sbjct: 1 MTFSTFTRKMRGRMRSNTCRIVLLTSLVWVIFDFVLIARYSDCIGKDGWRCKRSGEYDVE 60
Query: 398 ISXXXXXXXXXXXXXXXXLQQDVGDDDTNLEENVLGQEVEDDGVLLSPYPRSRLKRWQRA 577
+ + + D + ++GQ G+ ++ YP LK+W A
Sbjct: 61 LPNAERLVDDNQLVDDNEINTEKSLDGESGGALIMGQGFASGGISMT-YPSVVLKKWFLA 119
Query: 578 PSV 586
PSV
Sbjct: 120 PSV 122
>AE014134-879|ABI31292.1| 630|Drosophila melanogaster CG31651-PB,
isoform B protein.
Length = 630
Score = 63.3 bits (147), Expect = 2e-10
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 4/123 (3%)
Frame = +2
Query: 230 VTRGVFVKMFRSKIRIHTCRIILLTSLAWLLVDVMLLAMYSDCFG-DG--CNQK-TVTSE 397
+T F + R ++R +TCRI+LLTSL W++ D +L+A YSDC G DG C + E
Sbjct: 1 MTFSTFTRKMRGRMRSNTCRIVLLTSLVWVIFDFVLIARYSDCIGKDGWRCKRSGEYDVE 60
Query: 398 ISXXXXXXXXXXXXXXXXLQQDVGDDDTNLEENVLGQEVEDDGVLLSPYPRSRLKRWQRA 577
+ + + D + ++GQ G+ ++ YP LK+W A
Sbjct: 61 LPNAERLVDDNQLVDDNEINTEKSLDGESGGALIMGQGFASGGISMT-YPSVVLKKWFLA 119
Query: 578 PSV 586
PSV
Sbjct: 120 PSV 122
>AY268066-1|AAQ56702.1| 617|Drosophila melanogaster
UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
protein.
Length = 617
Score = 56.4 bits (130), Expect = 3e-08
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Frame = +2
Query: 269 IRIHTCRIILLTSLAWLLVDVMLLAMYSDCFG-DG--CNQK-TVTSEISXXXXXXXXXXX 436
+R +TCRI+LLTSL W++ D +L+A YSDC G DG C + E+
Sbjct: 1 MRSNTCRIVLLTSLVWVIFDFVLIARYSDCIGKDGWRCKRSGEYDVELPNAERLVDDNQL 60
Query: 437 XXXXXLQQDVGDDDTNLEENVLGQEVEDDGVLLSPYPRSRLKRWQRAPSV 586
+ + D + ++GQ G+ ++ YP LK+W APSV
Sbjct: 61 VDDNEINTEKSLDGESGGALIMGQGFASGGISMT-YPSVVLKKWFLAPSV 109
>D43795-1|BAA07853.1| 519|Drosophila melanogaster CP-1 protein.
Length = 519
Score = 28.7 bits (61), Expect = 6.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 554 RLKRWQRAPSVIPQGESP 607
R++RW R P+V+P+G P
Sbjct: 159 RVRRWPRRPAVVPRGVEP 176
>BT004902-1|AAO47880.1| 746|Drosophila melanogaster LD08432p
protein.
Length = 746
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 418 CLLPN*NFTSNSLLITSVAEAVRIHSQQHNVHQ*PSQGRQQ 296
C PN +++I+S AEA++ H QQ HQ Q +QQ
Sbjct: 242 CPTPNGASYGETIVISSEAEALQHHHQQQQQHQ-QQQHQQQ 281
>AE014297-2133|AAF55262.2| 746|Drosophila melanogaster CG10278-PA
protein.
Length = 746
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 418 CLLPN*NFTSNSLLITSVAEAVRIHSQQHNVHQ*PSQGRQQ 296
C PN +++I+S AEA++ H QQ HQ Q +QQ
Sbjct: 242 CPTPNGASYGETIVISSEAEALQHHHQQQQQHQ-QQQHQQQ 281
>AB124838-1|BAD00020.1| 746|Drosophila melanogaster transcription
factor dGATAe protein.
Length = 746
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 418 CLLPN*NFTSNSLLITSVAEAVRIHSQQHNVHQ*PSQGRQQ 296
C PN +++I+S AEA++ H QQ HQ Q +QQ
Sbjct: 242 CPTPNGASYGETIVISSEAEALQHHHQQQQQHQ-QQQHQQQ 281
>AB054996-1|BAB21551.1| 571|Drosophila melanogaster dGATAe protein.
Length = 571
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 418 CLLPN*NFTSNSLLITSVAEAVRIHSQQHNVHQ*PSQGRQQ 296
C PN +++I+S AEA++ H QQ HQ Q +QQ
Sbjct: 242 CPTPNGASYGETIVISSEAEALQHHHQQQQQHQ-QQQHQQQ 281
>AB054995-1|BAB21550.1| 704|Drosophila melanogaster GATA factor e
protein.
Length = 704
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 418 CLLPN*NFTSNSLLITSVAEAVRIHSQQHNVHQ*PSQGRQQ 296
C PN +++I+S AEA++ H QQ HQ Q +QQ
Sbjct: 200 CPTPNGASYGETIVISSEAEALQHHHQQQQQHQ-QQQHQQQ 239
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,006,061
Number of Sequences: 53049
Number of extensions: 480650
Number of successful extensions: 1113
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -