Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8c07
         (668 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.65 
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    24   1.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    24   1.1  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   2.6  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   2.6  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   2.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.6  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   6.1  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = +3

Query: 468 GKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSD----FSPPRRGNPVKRNNSPKKN 626
           G+   D +DD+ N  E    G+++++K+   D D     SP RR         P  N
Sbjct: 274 GEGADDRDDDEENEEEEDGRGQSEAEKRLKLDEDADGAVSPLRREKDRGSREYPTSN 330


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 507 HLAYHLRNHCTFFQRPIR 454
           HL YHLRNH  F  +P +
Sbjct: 3   HLEYHLRNH--FGSKPFK 18


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/49 (22%), Positives = 23/49 (46%)
 Frame = +3

Query: 429 DVKETEKENELVFGKMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFS 575
           D+K T  +   +    ++ S+ D     + +P G   ++  H + +DFS
Sbjct: 436 DIKLTTNQQRNILNTFWTKSDVDLSRGLDFTPRGAVLARFTHLNHADFS 484


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/37 (32%), Positives = 14/37 (37%)
 Frame = +3

Query: 471 KMYSDSEDDKPNVSEASPSGRAKSKKKHNSDSDFSPP 581
           K   + EDD     +A P      KK    D D  PP
Sbjct: 214 KKNKEDEDDGATPRKAPPQLSTTDKKGSAIDLDIGPP 250


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/44 (22%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 321 PEHIKKQEQFTTSSKWKIVNQDDGFNSKL-QIQEIKKDVKETEK 449
           P+H+ +       ++WK+ N +DG+   +  + +I +D++ +E+
Sbjct: 507 PQHLPRIHH---DAEWKVGNHEDGYLIGVNNLIDIFQDIRNSEE 547


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/44 (22%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 321 PEHIKKQEQFTTSSKWKIVNQDDGFNSKL-QIQEIKKDVKETEK 449
           P+H+ +       ++WK+ N +DG+   +  + +I +D++ +E+
Sbjct: 422 PQHLPRIHH---DAEWKVGNHEDGYLIGVNNLIDIFQDIRNSEE 462


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/44 (22%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 321 PEHIKKQEQFTTSSKWKIVNQDDGFNSKL-QIQEIKKDVKETEK 449
           P+H+ +       ++WK+ N +DG+   +  + +I +D++ +E+
Sbjct: 741 PQHLPRIHH---DAEWKVGNHEDGYLIGVNNLIDIFQDIRNSEE 781


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 384 DDGFNSKLQIQEIKKDVKETEKENELVFGKMYSDSEDDK 500
           D+G  SK ++ + +KD    +K+   V+  +    ED K
Sbjct: 220 DEGKESKTKLSQWRKDGGTVKKKVNYVYRSVDQVLEDGK 258


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,185
Number of Sequences: 438
Number of extensions: 2641
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)