Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8c06
(685 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6N9X3 Cluster: Cytochrome c oxidase polyprotein IV; n=... 194 2e-48
UniRef50_Q9VIQ8 Cluster: CG10664-PA, isoform A; n=12; Endopteryg... 182 7e-45
UniRef50_Q27123 Cluster: Cytochrome c oxidase subunit IV; n=2; P... 167 2e-40
UniRef50_UPI00015B49D2 Cluster: PREDICTED: similar to cytochrome... 158 1e-37
UniRef50_Q8T4H8 Cluster: AT07685p; n=2; melanogaster subgroup|Re... 156 5e-37
UniRef50_Q0PWT8 Cluster: Cytochrome c oxidase polypeptide IV-lik... 146 6e-34
UniRef50_UPI00015B5FAE Cluster: PREDICTED: similar to cytochrome... 139 7e-32
UniRef50_P80971 Cluster: Cytochrome c oxidase subunit 4 isoform ... 119 6e-26
UniRef50_O46584 Cluster: Cytochrome c oxidase subunit 4 isoform ... 118 1e-25
UniRef50_P13073 Cluster: Cytochrome c oxidase subunit 4 isoform ... 117 2e-25
UniRef50_Q9U329 Cluster: Putative uncharacterized protein; n=2; ... 116 5e-25
UniRef50_UPI0000589031 Cluster: PREDICTED: similar to cytochrome... 115 9e-25
UniRef50_Q71SZ7 Cluster: Cytochrome c oxidase subunit IV; n=5; T... 114 2e-24
UniRef50_Q96KJ9 Cluster: Cytochrome c oxidase subunit 4 isoform ... 111 2e-23
UniRef50_UPI000069ED0B Cluster: Cytochrome c oxidase subunit 4 i... 106 4e-22
UniRef50_Q6PH92 Cluster: MGC68573 protein; n=4; Xenopus|Rep: MGC... 106 6e-22
UniRef50_Q5DF62 Cluster: SJCHGC09183 protein; n=2; Schistosoma j... 96 6e-19
UniRef50_Q6PBK2 Cluster: LOC402880 protein; n=4; Danio rerio|Rep... 95 1e-18
UniRef50_O46582 Cluster: Cytochrome c oxidase subunit 4 isoform ... 76 9e-13
UniRef50_A7RRF4 Cluster: Predicted protein; n=1; Nematostella ve... 60 5e-08
UniRef50_P06810 Cluster: Cytochrome c oxidase polypeptide V, mit... 48 2e-04
UniRef50_O93980 Cluster: Cytochrome c oxidase polypeptide V, mit... 44 0.003
UniRef50_Q4P348 Cluster: Putative uncharacterized protein; n=1; ... 39 0.13
UniRef50_O74988 Cluster: Cytochrome c oxidase polypeptide V, mit... 37 0.53
UniRef50_Q0V3Y7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.92
UniRef50_UPI0000DB7C1C Cluster: PREDICTED: similar to CG32113-PA... 36 1.2
UniRef50_Q73QH4 Cluster: Membrane protein, putative; n=1; Trepon... 34 2.8
UniRef50_Q5ZWJ9 Cluster: Transposase, IS4 family TnpA; n=6; Legi... 34 2.8
UniRef50_Q8UHJ9 Cluster: Putative uncharacterized protein Atu068... 33 4.9
UniRef50_Q303K6 Cluster: ROK; n=5; Streptococcus suis|Rep: ROK -... 33 4.9
UniRef50_Q9FJA1 Cluster: Similarity to retroelement pol polyprot... 33 4.9
UniRef50_A7QYQ3 Cluster: Chromosome chr5 scaffold_253, whole gen... 33 4.9
UniRef50_Q5B1Y2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q4N6H3 Cluster: Putative uncharacterized protein; n=2; ... 33 8.6
UniRef50_A2ESA7 Cluster: Surface antigen BspA-like; n=5; Trichom... 33 8.6
>UniRef50_A6N9X3 Cluster: Cytochrome c oxidase polyprotein IV; n=1;
Ornithodoros parkeri|Rep: Cytochrome c oxidase
polyprotein IV - Ornithodoros parkeri
Length = 180
Score = 194 bits (472), Expect = 2e-48
Identities = 87/155 (56%), Positives = 110/155 (70%)
Frame = +3
Query: 105 VRSVHNRCRIGNRDWVGYGVNGMANYKDEAQFPFPAVRFKENTKDIWALREKEKGDWKLL 284
V + H R RIG R+ VG+G+NG Y D FP PA+R+KE T +I LREKEKGDWK L
Sbjct: 25 VAAYHGRQRIGKREVVGFGMNGEYTYYDRPDFPMPAIRYKEPTAEIEKLREKEKGDWKNL 84
Query: 285 CCEEKKALYRASFCQTFAEFQHYTGEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESL 464
+E+KALYR SFCQT+AE GEWK + L+ + F W +F VY P+P SL
Sbjct: 85 SLDERKALYRFSFCQTYAEMNAPRGEWKPTIAGALLCMGFTVWVYVFLKKCVYGPVPSSL 144
Query: 465 SKESQKAQLRRMLELRVNPIDGLSSKWDYDNDRWK 569
S ES+KAQL+RM++LRVNPIDG++SKWDY+N+RWK
Sbjct: 145 SPESKKAQLQRMIDLRVNPIDGIASKWDYENNRWK 179
>UniRef50_Q9VIQ8 Cluster: CG10664-PA, isoform A; n=12;
Endopterygota|Rep: CG10664-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 182
Score = 182 bits (443), Expect = 7e-45
Identities = 82/155 (52%), Positives = 108/155 (69%)
Frame = +3
Query: 105 VRSVHNRCRIGNRDWVGYGVNGMANYKDEAQFPFPAVRFKENTKDIWALREKEKGDWKLL 284
V +VH +IG R+ VGYG NG A Y D +P PAVRF+E T +I ALR KE+GDWK L
Sbjct: 27 VAAVHTLDKIGKREIVGYGWNGTACYADRVDYPLPAVRFREPTNEINALRAKEQGDWKKL 86
Query: 285 CCEEKKALYRASFCQTFAEFQHYTGEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESL 464
+E KALYRASFCQT AE Q +GEWKL LG L+ + W + + +VY+ LP +
Sbjct: 87 STQEIKALYRASFCQTIAEVQAGSGEWKLHLGVSLLFCAAAIWVAVLMNIFVYDELPVTF 146
Query: 465 SKESQKAQLRRMLELRVNPIDGLSSKWDYDNDRWK 569
+E QKAQL+R+++L +NP+ GL+SKWDY+N +WK
Sbjct: 147 DEEHQKAQLQRIIDLEINPVTGLTSKWDYENKKWK 181
>UniRef50_Q27123 Cluster: Cytochrome c oxidase subunit IV; n=2;
Protostomia|Rep: Cytochrome c oxidase subunit IV -
Urechis caupo (Innkeeper worm) (Spoonworm)
Length = 186
Score = 167 bits (406), Expect = 2e-40
Identities = 73/147 (49%), Positives = 105/147 (71%)
Frame = +3
Query: 129 RIGNRDWVGYGVNGMANYKDEAQFPFPAVRFKENTKDIWALREKEKGDWKLLCCEEKKAL 308
++GNRD VGYG+NG+ Y D +FP PAVR+ ENT ++ ALREKEKGDW L EEKKAL
Sbjct: 40 KLGNRDIVGYGMNGLPTYIDLPEFPAPAVRYGENTAEVVALREKEKGDWNSLSVEEKKAL 99
Query: 309 YRASFCQTFAEFQHYTGEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQ 488
YRASF +T++E + GEWK +L +++ +S W MI+ VY PLP ++++E ++
Sbjct: 100 YRASFRETYSEMKAPNGEWKSVLAGVILGISLTGWVMIWMKQNVYPPLPHTINEEYKEGN 159
Query: 489 LRRMLELRVNPIDGLSSKWDYDNDRWK 569
L+ M++ PI G++SK+DY+N+RWK
Sbjct: 160 LKMMVKQNQGPITGVASKYDYENNRWK 186
>UniRef50_UPI00015B49D2 Cluster: PREDICTED: similar to cytochrome c
oxidase subunit IV; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to cytochrome c oxidase subunit IV -
Nasonia vitripennis
Length = 167
Score = 158 bits (384), Expect = 1e-37
Identities = 77/143 (53%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
Frame = +3
Query: 108 RSVHN-RCRIGNRDWVGYGVNGMANYKDEAQFPFPAVRFKENTKDIWALREKEKGDWKLL 284
RSV+ + +IGNR+ V +G+N Y D FP PA+R+KE T DI ALREKEKGDWK L
Sbjct: 20 RSVYTIQNKIGNREVVCHGMNSEPIYIDTTDFPMPAIRYKEVTPDIQALREKEKGDWKKL 79
Query: 285 CCEEKKALYRASFCQTFAEFQHYTGEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESL 464
E+KKALYRASF QTFAE + +G+WK ++G L+ +S W ++ +YVY PLP SL
Sbjct: 80 SVEDKKALYRASFRQTFAEMEAPSGDWKSVIGLSLVGISISMWLFVWTKHYVYPPLPSSL 139
Query: 465 SKESQKAQLRRMLELRVNPIDGL 533
S+E+Q AQL RM L + PI GL
Sbjct: 140 SEENQLAQLERMKLLDMQPITGL 162
>UniRef50_Q8T4H8 Cluster: AT07685p; n=2; melanogaster subgroup|Rep:
AT07685p - Drosophila melanogaster (Fruit fly)
Length = 176
Score = 156 bits (378), Expect = 5e-37
Identities = 72/149 (48%), Positives = 98/149 (65%)
Frame = +3
Query: 123 RCRIGNRDWVGYGVNGMANYKDEAQFPFPAVRFKENTKDIWALREKEKGDWKLLCCEEKK 302
R + +R VG+G+NG Y D PFPA+R++E + ++ ALREKE DWK L +EKK
Sbjct: 28 RLMVADRQVVGHGINGRPIYFDSPDCPFPAIRYREVSPELCALREKELDDWKKLSLDEKK 87
Query: 303 ALYRASFCQTFAEFQHYTGEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQK 482
LYR SFCQT+AEFQH T EWK+ LG L +S I +Y LP++ + E Q
Sbjct: 88 QLYRYSFCQTYAEFQHITPEWKMCLGVALWLVSIGIAISITMKTVLYGKLPDTFNDERQS 147
Query: 483 AQLRRMLELRVNPIDGLSSKWDYDNDRWK 569
AQLRR+++L++NPI GL+SKW Y ++WK
Sbjct: 148 AQLRRIIQLQMNPITGLASKWCYRENKWK 176
>UniRef50_Q0PWT8 Cluster: Cytochrome c oxidase polypeptide IV-like
protein; n=1; Diaphorina citri|Rep: Cytochrome c oxidase
polypeptide IV-like protein - Diaphorina citri (Asian
citrus psyllid)
Length = 155
Score = 146 bits (353), Expect = 6e-34
Identities = 67/147 (45%), Positives = 98/147 (66%), Gaps = 2/147 (1%)
Frame = +3
Query: 138 NRDWVGYGVNGMANYKDEAQFPFPAVRFKENTKDIWALREKEKGDWKLLCCEEKKALYRA 317
NR+ VGYG NG Y D FP+P++RFK TK++ L++KEKGDWK L EEKK LYRA
Sbjct: 10 NREVVGYGFNGEPGYIDNPMFPYPSIRFKAITKELEPLKQKEKGDWKNLTLEEKKTLYRA 69
Query: 318 SFCQTFAEFQHYTGEWKLILG--YLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQL 491
SF QTF E TGEWK G ++++ +S + +++ ++ E+LS+E ++ L
Sbjct: 70 SFAQTFVEMNAPTGEWKGAFGIAFMVVTVSLLTYVLMYK-VGIFPEKAETLSEEHRQEML 128
Query: 492 RRMLELRVNPIDGLSSKWDYDNDRWKQ 572
++M++LR NPI G +SKWDY+ + WK+
Sbjct: 129 QKMIDLRWNPITGTASKWDYEKNDWKK 155
>UniRef50_UPI00015B5FAE Cluster: PREDICTED: similar to cytochrome c
oxidase subunit IV; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to cytochrome c oxidase subunit IV -
Nasonia vitripennis
Length = 207
Score = 139 bits (336), Expect = 7e-32
Identities = 65/139 (46%), Positives = 90/139 (64%)
Frame = +3
Query: 117 HNRCRIGNRDWVGYGVNGMANYKDEAQFPFPAVRFKENTKDIWALREKEKGDWKLLCCEE 296
H R IGNR+ V +G+NG Y D +PFPA+R++E T ++ ALREKE+GDW+ L E
Sbjct: 43 HRRI-IGNREIVCHGMNGNPTYIDSWDYPFPAIRYRECTPELMALREKERGDWRKLTIGE 101
Query: 297 KKALYRASFCQTFAEFQHYTGEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKES 476
KK LYRASF QTF+E Q +WK I+G +L+ +S W +F H+ VY PES S E+
Sbjct: 102 KKCLYRASFRQTFSELQAPNSDWKCIIGVVLMGISLSLWIHLFIHHKVYVKWPESFSTEN 161
Query: 477 QKAQLRRMLELRVNPIDGL 533
+ AQ R ++L + P G+
Sbjct: 162 RIAQYYRQVDLNMQPFSGI 180
>UniRef50_P80971 Cluster: Cytochrome c oxidase subunit 4 isoform 2,
mitochondrial precursor; n=7; Clupeocephala|Rep:
Cytochrome c oxidase subunit 4 isoform 2, mitochondrial
precursor - Thunnus obesus (Bigeye tuna)
Length = 176
Score = 119 bits (287), Expect = 6e-26
Identities = 57/131 (43%), Positives = 79/131 (60%), Gaps = 1/131 (0%)
Frame = +3
Query: 180 YKDEAQFPFPAVRFKEN-TKDIWALREKEKGDWKLLCCEEKKALYRASFCQTFAEFQHYT 356
Y D P P +KE+ T +L++KEKG W L EEK ALYR FCQT++E + +
Sbjct: 46 YWDRLDTPLPDRPYKEDLTAADKSLKQKEKGPWGQLSKEEKIALYRLMFCQTYSEMKQPS 105
Query: 357 GEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDGLS 536
EWK + G + I L F + + YVY P P + E + QL+RML++RVNPI+G S
Sbjct: 106 SEWKTVFGGIFIFLGFTGLVVWWQALYVYPPRPRTFDDEWKAKQLKRMLDMRVNPIEGFS 165
Query: 537 SKWDYDNDRWK 569
+KWDY+ +WK
Sbjct: 166 AKWDYEKGQWK 176
>UniRef50_O46584 Cluster: Cytochrome c oxidase subunit 4 isoform 1;
n=7; Eutheria|Rep: Cytochrome c oxidase subunit 4
isoform 1 - Aotus azarai (Southern owl monkey) (Aotus
azarae)
Length = 144
Score = 118 bits (284), Expect = 1e-25
Identities = 55/135 (40%), Positives = 77/135 (57%), Gaps = 1/135 (0%)
Frame = +3
Query: 171 MANYKDEAQFPFPAV-RFKENTKDIWALREKEKGDWKLLCCEEKKALYRASFCQTFAEFQ 347
+ +Y D +P P V + + AL+EKEK W L +EK LYR F ++FAE
Sbjct: 10 LPSYVDRRDYPLPDVAHVRHLSASQKALKEKEKASWSSLSMDEKVELYRIQFKESFAEMN 69
Query: 348 HYTGEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPID 527
+ EWK ++G + + F +I YVY PLP + KE Q +RML+L+VNP+D
Sbjct: 70 RGSNEWKTVVGAAMFFIGFTAILIILEKRYVYGPLPHTFDKEWVAMQTKRMLDLKVNPVD 129
Query: 528 GLSSKWDYDNDRWKQ 572
GL+SKWDYD WK+
Sbjct: 130 GLASKWDYDKKEWKK 144
>UniRef50_P13073 Cluster: Cytochrome c oxidase subunit 4 isoform 1,
mitochondrial precursor; n=28; Euteleostomi|Rep:
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial
precursor - Homo sapiens (Human)
Length = 169
Score = 117 bits (282), Expect = 2e-25
Identities = 54/132 (40%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Frame = +3
Query: 180 YKDEAQFPFPAV-RFKENTKDIWALREKEKGDWKLLCCEEKKALYRASFCQTFAEFQHYT 356
Y D P P V K + AL+EKEK W L +EK LYR F ++FAE +
Sbjct: 38 YMDRRDHPLPEVAHVKHLSASQKALKEKEKASWSSLSMDEKVELYRIKFKESFAEMNRGS 97
Query: 357 GEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDGLS 536
EWK ++G + + F +++ +YVY PLP+S KE Q +RML+++VNPI GL+
Sbjct: 98 NEWKTVVGGAMFFIGFTALVIMWQKHYVYGPLPQSFDKEWVAKQTKRMLDMKVNPIQGLA 157
Query: 537 SKWDYDNDRWKQ 572
SKWDY+ + WK+
Sbjct: 158 SKWDYEKNEWKK 169
>UniRef50_Q9U329 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 175
Score = 116 bits (279), Expect = 5e-25
Identities = 57/147 (38%), Positives = 82/147 (55%)
Frame = +3
Query: 129 RIGNRDWVGYGVNGMANYKDEAQFPFPAVRFKENTKDIWALREKEKGDWKLLCCEEKKAL 308
+ R+ VGYG NG Y+D + +PA+RF++ I +R KE+ DWK L EEKK L
Sbjct: 29 KAAGRELVGYGANGDNIYQDRLDYWYPAIRFRKEDSVIAPIRAKEQADWKNLSAEEKKLL 88
Query: 309 YRASFCQTFAEFQHYTGEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQ 488
YR SF QT +EF+ TG WK+I +L L + + + VY LP + E ++AQ
Sbjct: 89 YRYSFRQTLSEFEAPTGYWKVISAVILSVLGLCTYYAVLLNVCVYPELPPTFQNEYKEAQ 148
Query: 489 LRRMLELRVNPIDGLSSKWDYDNDRWK 569
+ R L L G + +DY+N +WK
Sbjct: 149 VERALVLEKGQFLGAPTHYDYENKKWK 175
>UniRef50_UPI0000589031 Cluster: PREDICTED: similar to cytochrome c
oxidase subunit IV precursor; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to cytochrome c
oxidase subunit IV precursor - Strongylocentrotus
purpuratus
Length = 162
Score = 115 bits (277), Expect = 9e-25
Identities = 53/134 (39%), Positives = 83/134 (61%), Gaps = 3/134 (2%)
Frame = +3
Query: 180 YKDEAQFPFPAVRFKENTK---DIWALREKEKGDWKLLCCEEKKALYRASFCQTFAEFQH 350
Y D +P P RF + + ++ AL+ KE+GDWK L +KK LYR SF +T++E +
Sbjct: 29 YADRLDYPAPNCRFVQEAELSAEMQALKVKERGDWKALTQADKKELYRMSFNKTYSEMRA 88
Query: 351 YTGEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDG 530
TGEWK ++G + IA++ F Y+ PLP ++S E Q+AQLR + +R P+ G
Sbjct: 89 PTGEWKYVIGGVCIAIAVSGVIYGFQKAYISPPLPHTMSDEWQEAQLRYQIAIRNGPVTG 148
Query: 531 LSSKWDYDNDRWKQ 572
++S+WDY+ + WK+
Sbjct: 149 IASQWDYEKNEWKK 162
>UniRef50_Q71SZ7 Cluster: Cytochrome c oxidase subunit IV; n=5;
Tetrapoda|Rep: Cytochrome c oxidase subunit IV -
Meleagris gallopavo (Common turkey)
Length = 171
Score = 114 bits (274), Expect = 2e-24
Identities = 53/132 (40%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
Frame = +3
Query: 180 YKDEAQFPFPAVRF-KENTKDIWALREKEKGDWKLLCCEEKKALYRASFCQTFAEFQHYT 356
Y D P P F KE + AL+EKEK W L +EK LYR F +++AE T
Sbjct: 40 YVDRRDVPLPEAAFVKELSAQQKALKEKEKPSWTALSVDEKVELYRIKFNESYAEMNKGT 99
Query: 357 GEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDGLS 536
EWK +LG +L L +I+ Y+Y P+P + S E Q +RML++R+NP+ G+S
Sbjct: 100 NEWKTVLGGVLFFLGVSGLILIWQKMYMYGPIPHTFSDEWLSMQTKRMLDMRINPVQGIS 159
Query: 537 SKWDYDNDRWKQ 572
S+WDY+ + WK+
Sbjct: 160 SQWDYEKNEWKK 171
>UniRef50_Q96KJ9 Cluster: Cytochrome c oxidase subunit 4 isoform 2,
mitochondrial precursor; n=12; Theria|Rep: Cytochrome c
oxidase subunit 4 isoform 2, mitochondrial precursor -
Homo sapiens (Human)
Length = 171
Score = 111 bits (267), Expect = 2e-23
Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
Frame = +3
Query: 198 FPFPAVRF-KENTKDIWALREKEKGDWKLLCCEEKKALYRASFCQTFAEFQHYTGEWKLI 374
+P P F E + AL+EKEKG W L EK ALYR F +TFAE + EWK +
Sbjct: 46 YPMPEEPFCTELNAEEQALKEKEKGSWTQLTHAEKVALYRLQFNETFAEMNRRSNEWKTV 105
Query: 375 LGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDGLSSKWDYD 554
+G + + F + + YV+ P P +L+ E + QL+RML+++VNP+ GL+S+WDY+
Sbjct: 106 MGCVFFFIGFAALVIWWQRVYVFPPKPITLTDERKAQQLQRMLDMKVNPVQGLASRWDYE 165
Query: 555 NDRWKQ 572
+WK+
Sbjct: 166 KKQWKK 171
>UniRef50_UPI000069ED0B Cluster: Cytochrome c oxidase subunit 4
isoform 2, mitochondrial precursor (EC 1.9.3.1)
(Cytochrome c oxidase subunit IV isoform 2) (COX IV-2).;
n=2; Tetrapoda|Rep: Cytochrome c oxidase subunit 4
isoform 2, mitochondrial precursor (EC 1.9.3.1)
(Cytochrome c oxidase subunit IV isoform 2) (COX IV-2).
- Xenopus tropicalis
Length = 169
Score = 106 bits (255), Expect = 4e-22
Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Frame = +3
Query: 180 YKDEAQFPFPAVRF-KENTKDIWALREKEKGDWKLLCCEEKKALYRASFCQTFAEFQHYT 356
Y + ++P P V F E AL+ KE G W L EEK ALYR SF Q++AE +
Sbjct: 38 YCERREYPLPDVPFVSELNPQQKALKLKENGPWGQLTKEEKLALYRISFNQSYAEMHSGS 97
Query: 357 -GEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDGL 533
EWK I+G +L L+F + ++ YVY P+P +LS++ Q +RM+++R+NP+ G
Sbjct: 98 KSEWKTIVGAVLYFLAFGGLYLWWHRIYVYGPVPHTLSEDWVAMQAKRMIDMRINPVTGF 157
Query: 534 SSKWDYDNDRWK 569
SS WDY+ +WK
Sbjct: 158 SSHWDYEKKQWK 169
>UniRef50_Q6PH92 Cluster: MGC68573 protein; n=4; Xenopus|Rep:
MGC68573 protein - Xenopus laevis (African clawed frog)
Length = 174
Score = 106 bits (254), Expect = 6e-22
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = +3
Query: 180 YKDEAQFPFPAVRFK-ENTKDIWALREKEKGDWKLLCCEEKKALYRASFCQTFAEFQHYT 356
Y D FP P + F+ E L+E+E+G WK L E+K +LY F +T+AE +
Sbjct: 43 YYDHRVFPLPDIPFQTELNSQEKTLKERERGPWKQLSQEDKISLYHIKFNKTYAEMNKPS 102
Query: 357 GEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDGLS 536
EWK + G + I + + YVY P P +L+ + + Q RRML+++++PI G +
Sbjct: 103 NEWKTVFGTIFIFFGLTGLIVWWQRVYVYPPKPHTLADDWKAMQARRMLDMKISPIQGFA 162
Query: 537 SKWDYDNDRWKQ 572
SKWDY+ + WK+
Sbjct: 163 SKWDYEKNEWKK 174
>UniRef50_Q5DF62 Cluster: SJCHGC09183 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC09183 protein - Schistosoma
japonicum (Blood fluke)
Length = 230
Score = 96.3 bits (229), Expect = 6e-19
Identities = 47/99 (47%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Frame = +3
Query: 132 IGNRDWVGYGVNGMANYKDEAQFPFPAVRFKENTKDIWALREKEKGDWKLLCCEEKKALY 311
IGNR+ VG+G NG+ Y D+ FP+P++RF+ +T +I LREKE+G+W L EE K LY
Sbjct: 41 IGNREIVGFGRNGVPMYYDDIAFPYPSIRFRNHTPEIAKLREKEQGEWGKLTEEEVKTLY 100
Query: 312 RASFCQTFAEFQHYTGEWKLIL--GYLLIALSFPFWAMI 422
R SF TFAE G+WKL L G++ I++ F+ I
Sbjct: 101 RHSFQSTFAEMVAPHGQWKLGLAYGFIFISIGLVFYIYI 139
>UniRef50_Q6PBK2 Cluster: LOC402880 protein; n=4; Danio rerio|Rep:
LOC402880 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 171
Score = 95.5 bits (227), Expect = 1e-18
Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Frame = +3
Query: 180 YKDEAQFPFPAVRFKEN-TKDIWALREKEKGDWKLLCCEEKKALYRASFCQTFAEFQHYT 356
Y + P P V F N + + L+EKEKG W L EEK A+YR + +F E + +
Sbjct: 41 YNNRLDTPLPDVPFVRNLSAEQKKLKEKEKGPWTQLSKEEKLAIYRLTHELSFPEMRKGS 100
Query: 357 GEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDGLS 536
EW +L + L F + + +VY +P +LS+E + Q +RML+++VNPI G +
Sbjct: 101 KEWMTVLAGVFFFLGFTGLLVWWQRVFVYGDVPHTLSQEWIEKQTQRMLDMKVNPITGFA 160
Query: 537 SKWDYDNDRWK 569
KWDY+ +WK
Sbjct: 161 HKWDYEKKQWK 171
>UniRef50_O46582 Cluster: Cytochrome c oxidase subunit 4 isoform 1;
n=3; Cebidae|Rep: Cytochrome c oxidase subunit 4 isoform
1 - Saimiri sciureus (Common squirrel monkey)
Length = 124
Score = 75.8 bits (178), Expect = 9e-13
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Frame = +3
Query: 177 NYKDEAQFPFPAV-RFKENTKDIWALREKEKGDWKLLCCEEKKALYRASFCQTFAEFQHY 353
+Y D +P P V + + AL+EKEK W L +EK
Sbjct: 12 SYVDRRDYPLPDVAHVRHLSASQKALKEKEKASWSSLSMDEKVE---------------- 55
Query: 354 TGEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDGL 533
K ++G + + F +I YVY PLP + KE Q +RML+L++NPIDGL
Sbjct: 56 ----KTVVGAAMFFIGFTAILVILEKRYVYGPLPHTFDKEWVAMQTKRMLDLKMNPIDGL 111
Query: 534 SSKWDYDNDRWKQ 572
+SKWDY+ WK+
Sbjct: 112 ASKWDYEKKEWKK 124
>UniRef50_A7RRF4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 141
Score = 60.1 bits (139), Expect = 5e-08
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Frame = +3
Query: 201 PFPAVRFKENTKDIWALREKEKGDWKLLCCEEKKALYRASFCQTFAEFQHYTGEWKLILG 380
P P R +E D+ AL+ KEKG W L E++ ALY++ F +T E + K ++G
Sbjct: 26 PVPIAR-QEFGSDLEALKAKEKGPWTALSKEDRVALYQSQFPKTLQESKLGEPYAKKVVG 84
Query: 381 --YLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDGLSSK 542
+LI+LS F+A F Y+ P +L+++ +A +M R NPI G +SK
Sbjct: 85 GVGVLISLSLAFFA--FLRTYIGPEPPPTLNEDWIRASEEKMRRQRTNPITGFTSK 138
>UniRef50_P06810 Cluster: Cytochrome c oxidase polypeptide V,
mitochondrial precursor; n=10; Pezizomycotina|Rep:
Cytochrome c oxidase polypeptide V, mitochondrial
precursor - Neurospora crassa
Length = 171
Score = 48.0 bits (109), Expect = 2e-04
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Frame = +3
Query: 237 DIW-ALREKEKGDWKLLCCEEKKALYRASFCQTFAEFQHYTGEWKLILGYLLIALSFPFW 413
++W ALR++ KG+W L +EKKA Y +F GE K +L Y + + F
Sbjct: 55 ELWMALRDRMKGNWADLTLQEKKAAYYIAFGPHGPRALPPPGEQKKVLAYTVAGVFLSF- 113
Query: 414 AMIFNHYYVY-EPLPESLSKESQKAQLRRMLELRVNPIDGLSSK 542
+IF + +P P +++KE Q+A + + +P+ GL+S+
Sbjct: 114 -VIFATMRAFAKPPPATMTKEWQEATNEFLKAQKSDPLTGLTSE 156
>UniRef50_O93980 Cluster: Cytochrome c oxidase polypeptide V,
mitochondrial precursor; n=8; Trichocomaceae|Rep:
Cytochrome c oxidase polypeptide V, mitochondrial
precursor - Aspergillus niger
Length = 197
Score = 44.4 bits (100), Expect = 0.003
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = +3
Query: 237 DIWA-LREKEKGDWKLLCCEEKKALYRASFCQTFAEFQHYTGEWKLILGYLLIALSFPFW 413
++W LR++ K DW + +EKKA Y SF GE L + + + L+ +
Sbjct: 80 ELWMQLRDRMKVDWHQMTLQEKKAAYWISFGPHGPRSVPPKGE-NLKIFFKVAQLTLVSF 138
Query: 414 AMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDGLSSK 542
+ + + +P P++++KE Q+A + ++NPI G+S++
Sbjct: 139 GIFYVIHLFAKPQPKTMTKEWQEASNEYAKQEKINPIYGISAE 181
>UniRef50_Q4P348 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 186
Score = 38.7 bits (86), Expect = 0.13
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +3
Query: 249 LREKEKGDWKLLCCEEKKALYRASFCQTFAEFQHYT--GEWKLILGYLLIALSFPFWAMI 422
L E ++ DWK L +EKKA Y SF + T G+ LG +L AL
Sbjct: 78 LEELQRKDWKELSLDEKKAAYFVSF-GPHGPRKPLTSPGQGAKTLGGVLAALGITSGIFY 136
Query: 423 FNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDGLSSK 542
P+ ++++KE Q+A LE + NPI G++S+
Sbjct: 137 LMRANGGAPV-KTMTKEWQEASNELALEQKQNPITGIASE 175
>UniRef50_O74988 Cluster: Cytochrome c oxidase polypeptide V,
mitochondrial precursor; n=1; Schizosaccharomyces
pombe|Rep: Cytochrome c oxidase polypeptide V,
mitochondrial precursor - Schizosaccharomyces pombe
(Fission yeast)
Length = 174
Score = 36.7 bits (81), Expect = 0.53
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Frame = +3
Query: 249 LREKEKGDWKLLCCEEKKALYRASFCQ----TFAEFQHYTGEWKLILGYLLIALSFPFWA 416
L ++K W L EEKKA Y +F + F+ T W + G + + +
Sbjct: 58 LYARQKQPWTTLSIEEKKAAYWIAFGEHGPRAFSHISQKTVFWGTVAG---LTIGVVLFG 114
Query: 417 MIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDGLSSK 542
+I P P ++++E Q+ M E ++NPI G +S+
Sbjct: 115 LIRTQA---APSPRTMTREWQEKSNEYMKENKINPISGEASE 153
>UniRef50_Q0V3Y7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 173
Score = 35.9 bits (79), Expect = 0.92
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Frame = +3
Query: 237 DIW-ALREKEKGDWKLLCCEEKKALYRASFCQTFAEFQHYTGEWKLILGYLLIALSFPFW 413
D+W +LR++ K DWK + +EKKA Y +F E + + + F
Sbjct: 52 DLWMSLRDRMKVDWKEMTMQEKKAAYYIAFGPHGPRRPPPPDEGRNVFFLSAGVICAAFA 111
Query: 414 AMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDG 530
F + P +++KE Q+A + PI G
Sbjct: 112 IFAFTRMFASPIRPRTMTKEWQEASEEYLKSQGTEPITG 150
>UniRef50_UPI0000DB7C1C Cluster: PREDICTED: similar to CG32113-PA,
partial; n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32113-PA, partial - Apis mellifera
Length = 918
Score = 35.5 bits (78), Expect = 1.2
Identities = 24/87 (27%), Positives = 46/87 (52%)
Frame = +3
Query: 411 WAMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPIDGLSSKWDYDNDRWKQ*KVFRD 590
W ++ Y+ P SL++ +A+ + +LE +++ +D L ++W D +R +
Sbjct: 78 WVIVIEQLYLVAG-PISLNEFDSEAEEQAILEYKLSRLDSLEARWRADTER--DPGYYAT 134
Query: 591 KRSS*EGKYNYVSSIV*NVIYDIILNI 671
SS NY +S+V N+I ++ LNI
Sbjct: 135 SYSS---WVNYGTSLVTNIIENLQLNI 158
>UniRef50_Q73QH4 Cluster: Membrane protein, putative; n=1; Treponema
denticola|Rep: Membrane protein, putative - Treponema
denticola
Length = 905
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 372 ILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQLRRMLELRVNPI 524
IL +LIA+ + + NHYY +S+SKE K Q+ + L + P+
Sbjct: 282 ILPIILIAVGSAYGIHVINHYYDEVVQDDSISKEEHKEQVVKALSEVIRPV 332
>UniRef50_Q5ZWJ9 Cluster: Transposase, IS4 family TnpA; n=6;
Legionella pneumophila|Rep: Transposase, IS4 family TnpA
- Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 482
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/49 (34%), Positives = 32/49 (65%)
Frame = -2
Query: 381 IPG*VSILLYSAEIRRRSDRKKHDITLSSLRSRGVSNLPSLSRARPRYL 235
+P V++ +Y+ E+ ++++RKK +TL L++ V+ PS RA+ R L
Sbjct: 247 LPSAVNLGIYTIEVAQKANRKKRQVTL-ELKTTSVTFSPSERRAKAREL 294
>UniRef50_Q8UHJ9 Cluster: Putative uncharacterized protein Atu0681;
n=1; Agrobacterium tumefaciens str. C58|Rep: Putative
uncharacterized protein Atu0681 - Agrobacterium
tumefaciens (strain C58 / ATCC 33970)
Length = 146
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 302 SVISCFFLSDLRRISALYRRMETHPGIFAYRSVFSLLGNDIQPLLCI*TSS 454
S++ C+ D R+ L+ ++ T P F + + S+L QP++C+ SS
Sbjct: 70 SLVRCYDRGDHARVLELFEQVSTEPSRFCFSTSVSILPAMRQPVICMGESS 120
>UniRef50_Q303K6 Cluster: ROK; n=5; Streptococcus suis|Rep: ROK -
Streptococcus suis 89/1591
Length = 399
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 296 LFAAEEFPISLLFLAQGPDIFGVFFES-HSWKGKLRFVLVIGHSVDAITDP 147
LF E P LF+ GP +F FF+S H + K ++ IGH+V + P
Sbjct: 196 LFHPESSPEQFLFIHIGPGLFCSFFDSEHILQNKNFYIGEIGHTVVDLNGP 246
>UniRef50_Q9FJA1 Cluster: Similarity to retroelement pol
polyprotein; n=1; Arabidopsis thaliana|Rep: Similarity
to retroelement pol polyprotein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 813
Score = 33.5 bits (73), Expect = 4.9
Identities = 26/90 (28%), Positives = 41/90 (45%)
Frame = +2
Query: 149 GRLWRQRNGQLQGRSAISLSSCEIQRKHQRYLGLAREREGRLETPLLRREESVISCFFLS 328
G LW Q G L+S ++RKHQ L +AR + + P+ + VI+ FL
Sbjct: 254 GNLWHQGLGHPSSPILQKLNSV-VERKHQHLLNVARALLFQSKVPMQYWSDCVITATFLI 312
Query: 329 DLRRISALYRRMETHPGIFAYRSVFSLLGN 418
+ R S L + + + + +SLL N
Sbjct: 313 N-RLSSPLLNNISPYELLLKRKPDYSLLKN 341
>UniRef50_A7QYQ3 Cluster: Chromosome chr5 scaffold_253, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr5 scaffold_253, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1857
Score = 33.5 bits (73), Expect = 4.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 417 MIFNHYYVYEPLPESLSK-ESQKAQLRRMLELRVNPIDGLSSKWDYDND 560
+IFNH V + P +L K + + QLR EL + + L W YD++
Sbjct: 69 LIFNHKAVVDHFPIALRKSDGCRVQLRNKEELMESDLSQLGDVWSYDDE 117
>UniRef50_Q5B1Y2 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 805
Score = 33.1 bits (72), Expect = 6.5
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -1
Query: 604 QEDRLSRNTFYCFHRSLS*SHLDDNPSIGLTRNSSILL 491
QE R S+ +F+ FH S S + + D PS+ L RN S+ L
Sbjct: 176 QEPRRSKRSFFSFHSSASSTSVRDQPSL-LERNRSVKL 212
>UniRef50_Q4N6H3 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 286
Score = 32.7 bits (71), Expect = 8.6
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 318 SFCQTFAEFQHY-TGEWKLILGYLLIALSFPFWAMIFNHYYVYEPLPESLSKESQKAQL 491
SF A FQ Y T E K+ G L+ SF FW + FNH + L S K +L
Sbjct: 104 SFAHDPAHFQQYPTVESKIRSGVELMLHSFSFWKLHFNHLIGFLSLGTSRPKNDNVFKL 162
>UniRef50_A2ESA7 Cluster: Surface antigen BspA-like; n=5;
Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
- Trichomonas vaginalis G3
Length = 940
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 316 LLSVRPSPNFSTIQENGNSSWDICLSLCLFPFGQ*YSTTIMYMNLFPNRCPK 471
LLSV P+++ N +S + C SL F FG+ + T+ N+F N C K
Sbjct: 736 LLSVITFPDYALANLNADSIFADCSSLTTFTFGKYCALTVFGSNIFSN-CVK 786
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,000,627
Number of Sequences: 1657284
Number of extensions: 14166346
Number of successful extensions: 40048
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 38722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40028
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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