Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8c06
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    25   2.9  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    24   3.9  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = -3

Query: 458 FGKRFIYIIVVEYHCPKGKRQSDKQISQDEFPFS 357
           FG++F  I ++ +  P+G++  D  +  D+  FS
Sbjct: 366 FGEKFKRIFLLLFCKPRGRQSPDDGLIHDDSSFS 399


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
            symporter protein.
          Length = 1127

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 9/99 (9%)
 Frame = +1

Query: 106  LEVFTIDVGSGTETGSVMAS------TEWPITRTKRNFPFQL*DSKKTPKISGPCARKRR 267
            L V  + VG G +   V+        +E+P T    +    L    K   + G C    R
Sbjct: 811  LSVAILRVGKGFDYSQVLGEDTVKFISEYPRTLVANDSTNDLLSHNKVSSLHGSCDSLSR 870

Query: 268  EIGNSSAAKRRKRYIVLLSVRPSP---NFSTIQENGNSS 375
             +  +S+     + I   SV P P   N   I E G  S
Sbjct: 871  NVSQASSTSDLSKTI---SVAPDPIDINAKLITETGQRS 906


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,167
Number of Sequences: 2352
Number of extensions: 14483
Number of successful extensions: 24
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)