Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8c02
         (643 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           28   0.22 
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    24   3.6  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   6.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   8.2  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 28.3 bits (60), Expect = 0.22
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 376 IYIGTNQGILSYDDAHSEINSERPIGDD 459
           +Y GT QG +   D H  + S+ P+G D
Sbjct: 164 VYFGTTQGQIIVMDVHGAMVSQVPLGSD 191


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +1

Query: 349 VAIDTVNNIIYIGTNQGILSYDDAHSEINSERPIGDDDVRNI 474
           V IDT NN++ + T+  I+  D +    ++E+     DV ++
Sbjct: 123 VLIDTGNNVVEVNTDDQIVLEDGSVEGESNEQEEAQIDVYHV 164


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 66  HNDWNHNCNTSIIVHRHEYPRGQMR 140
           HN  NHN   S+IV + +  + Q +
Sbjct: 29  HNSSNHNSAASLIVQQQQQQQQQQQ 53


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 589 YSFVLDSNGNIFY 627
           Y+F++D+NG + Y
Sbjct: 536 YAFIVDNNGRVLY 548


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,469
Number of Sequences: 2352
Number of extensions: 11270
Number of successful extensions: 36
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)