Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8b21
         (156 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   1.1  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    19   5.9  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    19   5.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    18   7.9  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    18   7.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    18   7.9  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +3

Query: 54  WEKQGQSVVSRWAEIAKLYPEKKAFIMGDR 143
           W   G +  S +    K+Y  K A I GD+
Sbjct: 481 WVTDGNNWCSPYIGWQKVYENKPAKIAGDK 510



 Score = 19.4 bits (38), Expect = 3.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 6  FLGLRVLLATMFRIWRWE 59
          FL L   ++ +   WRWE
Sbjct: 11 FLALLKNISALNGAWRWE 28


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 18.6 bits (36), Expect = 5.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 5   FSRSKGTVSDNVQDMALGKTRPVSGVKVGGNS 100
           F +    V   +QD  +GK+     V VGG++
Sbjct: 138 FKKCIDPVDKVLQDAKIGKSAVHEIVLVGGST 169


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 18.6 bits (36), Expect = 5.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +2

Query: 5   FSRSKGTVSDNVQDMALGKTRPVSGVKVGGNS 100
           F +    V   +QD  +GK+     V VGG++
Sbjct: 138 FKKCIDPVDKVLQDAKIGKSAVHEIVLVGGST 169


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +2

Query: 95  NSEAVSGKEGFYHGGQGSH 151
           NSE     + +  G QG H
Sbjct: 367 NSENYINHQNYVQGYQGEH 385


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
          protein.
          Length = 203

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = -2

Query: 56 PTPYPEHC 33
          P PYP  C
Sbjct: 26 PEPYPPRC 33


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = +2

Query: 95  NSEAVSGKEGFYHGGQGSH 151
           NSE     + +  G QG H
Sbjct: 315 NSENYINHQNYVQGYQGEH 333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,494
Number of Sequences: 336
Number of extensions: 557
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 32
effective length of database: 111,833
effective search space used:  2124827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)