Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8b21
         (156 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC003174-1|AAH03174.1|  285|Homo sapiens C1GALT1 protein protein.      31   0.52 
AJ278960-1|CAC82373.1|  363|Homo sapiens beta 1,3-galactosyltran...    31   0.52 
AJ243256-1|CAC80435.1|  363|Homo sapiens beta-1,3-Galactosyltran...    31   0.52 
AJ132443-1|CAC45046.1|  309|Homo sapiens beta-1,3-galactosyltran...    31   0.52 
AF155582-1|AAF81981.1|  363|Homo sapiens core1 UDP-galactose:N-a...    31   0.52 
AC005532-1|AAQ96887.1|  363|Homo sapiens unknown protein.              31   0.52 

>BC003174-1|AAH03174.1|  285|Homo sapiens C1GALT1 protein protein.
          Length = 285

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   FSRSKGTVSDNVQDMALGKTRPVSGVKVGGNSEAVSGKEGFY 130
           F   K T S +++D+ALG+   +  V+ G + + + GKE F+
Sbjct: 149 FKTDKCTHSSSIEDLALGRCMEIMNVEAGDSRDTI-GKETFH 189


>AJ278960-1|CAC82373.1|  363|Homo sapiens beta
           1,3-galactosyltransferase protein.
          Length = 363

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   FSRSKGTVSDNVQDMALGKTRPVSGVKVGGNSEAVSGKEGFY 130
           F   K T S +++D+ALG+   +  V+ G + + + GKE F+
Sbjct: 227 FKTDKCTHSSSIEDLALGRCMEIMNVEAGDSRDTI-GKETFH 267


>AJ243256-1|CAC80435.1|  363|Homo sapiens
           beta-1,3-Galactosyltransferase protein.
          Length = 363

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   FSRSKGTVSDNVQDMALGKTRPVSGVKVGGNSEAVSGKEGFY 130
           F   K T S +++D+ALG+   +  V+ G + + + GKE F+
Sbjct: 227 FKTDKCTHSSSIEDLALGRCMEIMNVEAGDSRDTI-GKETFH 267


>AJ132443-1|CAC45046.1|  309|Homo sapiens
           beta-1,3-galactosyltransferase b3Gal-T8 protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   FSRSKGTVSDNVQDMALGKTRPVSGVKVGGNSEAVSGKEGFY 130
           F   K T S +++D+ALG+   +  V+ G + + + GKE F+
Sbjct: 227 FKTDKCTHSSSIEDLALGRCMEIMNVEAGDSRDTI-GKETFH 267


>AF155582-1|AAF81981.1|  363|Homo sapiens core1
           UDP-galactose:N-acetylgalactosamine-alpha-R beta
           1,3-galactosyltransferas protein.
          Length = 363

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   FSRSKGTVSDNVQDMALGKTRPVSGVKVGGNSEAVSGKEGFY 130
           F   K T S +++D+ALG+   +  V+ G + + + GKE F+
Sbjct: 227 FKTDKCTHSSSIEDLALGRCMEIMNVEAGDSRDTI-GKETFH 267


>AC005532-1|AAQ96887.1|  363|Homo sapiens unknown protein.
          Length = 363

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +2

Query: 5   FSRSKGTVSDNVQDMALGKTRPVSGVKVGGNSEAVSGKEGFY 130
           F   K T S +++D+ALG+   +  V+ G + + + GKE F+
Sbjct: 227 FKTDKCTHSSSIEDLALGRCMEIMNVEAGDSRDTI-GKETFH 267


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,294,853
Number of Sequences: 237096
Number of extensions: 420797
Number of successful extensions: 1044
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 76,859,062
effective HSP length: 31
effective length of database: 69,509,086
effective search space used: 1390181720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)