Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8b20
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.6  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -1

Query: 257 LTFSMYLWVPCTLCISVICTSEGTAAAYQQSALYTVHTVS 138
           L F + LW+   L   + C +      Y+   LYT+  +S
Sbjct: 138 LFFVILLWISFFLNFMLHCNNTTWRCLYRWIVLYTLSKMS 177


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 445 PGSAKRSDPGPR 480
           PGS +RS P PR
Sbjct: 412 PGSDQRSTPSPR 423


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/23 (30%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = -2

Query: 160 FTRFT-QFLFHCIIQKCICLFFY 95
           F  FT   LF+C++   +C++++
Sbjct: 219 FIIFTIHLLFYCVLIILLCIYYF 241


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 293 PFLIRDLPGPTRLTFSMYLW 234
           PFL+ +L   T +T+  ++W
Sbjct: 399 PFLVANLAFVTIVTYETFVW 418


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,527
Number of Sequences: 336
Number of extensions: 3250
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)