Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8b17
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23565| Best HMM Match : Cytochrom_C1 (HMM E-Value=3.8e-15) 41 0.001
SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 30 1.4
SB_50798| Best HMM Match : CBS (HMM E-Value=2.8) 30 1.4
SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07) 30 1.4
SB_46740| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_39727| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_35108| Best HMM Match : AT_hook (HMM E-Value=0.15) 30 1.4
SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15) 30 1.4
SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11) 30 1.4
SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14) 30 1.4
SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_24375| Best HMM Match : rve (HMM E-Value=7.2e-15) 30 1.4
SB_213| Best HMM Match : rve (HMM E-Value=2.2e-08) 30 1.4
SB_50560| Best HMM Match : rve (HMM E-Value=7.2e-15) 29 3.3
SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45) 29 4.3
SB_59149| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_23565| Best HMM Match : Cytochrom_C1 (HMM E-Value=3.8e-15)
Length = 134
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 171 FALEQSVQASGSEAHPPHNPWNHSGWFSSLDH 266
+ L+ V A E HPP PW+H+G F+S+DH
Sbjct: 19 YLLQPDVHAEELELHPPKLPWSHNGVFNSIDH 50
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +2
Query: 578 SVRRGYEVYKQVC 616
S+RRG++VY+QVC
Sbjct: 52 SIRRGFQVYRQVC 64
>SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 942
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT+P
Sbjct: 616 DGCTDCNRNAPSQAATPPLPTSP 638
>SB_50798| Best HMM Match : CBS (HMM E-Value=2.8)
Length = 234
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT+P
Sbjct: 173 DGCTDCNRNAPSQAATPPLPTSP 195
>SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07)
Length = 1286
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT+P
Sbjct: 1157 DGCTDCNRNAPSQAATPPLPTSP 1179
>SB_46740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 134
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT+P
Sbjct: 73 DGCTDCNRNAPSQAATPPLPTSP 95
>SB_39727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT+P
Sbjct: 124 DGCTDCNRNAPSQAATPPLPTSP 146
>SB_35108| Best HMM Match : AT_hook (HMM E-Value=0.15)
Length = 1600
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT+P
Sbjct: 635 DGCTDCNRNAPSQAATPPLPTSP 657
>SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15)
Length = 1485
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT+P
Sbjct: 1249 DGCTDCNRNAPSQAATPPLPTSP 1271
>SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11)
Length = 1213
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT+P
Sbjct: 790 DGCTDCNRNAPSQAATPPLPTSP 812
>SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14)
Length = 707
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT+P
Sbjct: 450 DGCTDCNRNAPSQAATPPLPTSP 472
>SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1412
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT+P
Sbjct: 846 DGCTDCNRNAPSQAATPPLPTSP 868
>SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT+P
Sbjct: 275 DGCTDCNRNAPSQAATPPLPTSP 297
>SB_24375| Best HMM Match : rve (HMM E-Value=7.2e-15)
Length = 638
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT+P
Sbjct: 453 DGCTDCNRNAPSQAATPPLPTSP 475
>SB_213| Best HMM Match : rve (HMM E-Value=2.2e-08)
Length = 745
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT+P
Sbjct: 232 DGCTDCNRNAPSQAATPPLPTSP 254
>SB_50560| Best HMM Match : rve (HMM E-Value=7.2e-15)
Length = 364
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = -2
Query: 199 DACTDCS-SAKSRAPTPP-PTTP 137
D CTDC+ +A S+A TPP PT P
Sbjct: 173 DGCTDCNRNAPSQAATPPLPTYP 195
>SB_28941| Best HMM Match : PI3_PI4_kinase (HMM E-Value=2.8026e-45)
Length = 2022
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 165 LLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDHA 269
++FALEQ + + +A PH W H + + ++ A
Sbjct: 1138 IVFALEQLQKITNQQACTPHEQWFHRAYSALIEKA 1172
>SB_59149| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -1
Query: 158 NTSTYHSQSGQPHFSVFLSILECWWTADKPEAKLDHIFSKDVPHKSYRRWPP 3
N Y S S + V L E W DKP A LD+ + + YR PP
Sbjct: 402 NYGRYSSASDVWSYGVLL--FEIWSLGDKPYANLDNNEVVEAVSRGYRLPPP 451
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,982,672
Number of Sequences: 59808
Number of extensions: 387136
Number of successful extensions: 1180
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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