BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8b17
(650 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06994-1|CAA30052.1| 325|Homo sapiens protein ( Human mRNA for ... 52 2e-06
BT019798-1|AAV38601.1| 325|Homo sapiens cytochrome c-1 protein. 52 2e-06
J04444-1|AAA52135.1| 325|Homo sapiens protein ( Human cytochrom... 52 2e-06
DQ300360-1|ABB96244.1| 325|Homo sapiens cytochrome c-1 protein. 52 2e-06
CR541674-1|CAG46475.1| 325|Homo sapiens CYC1 protein. 52 2e-06
BC024650-1|AAH24650.1| 315|Homo sapiens Unknown (protein for IM... 52 2e-06
BC020566-1|AAH20566.1| 325|Homo sapiens cytochrome c-1 protein. 52 2e-06
BC015616-1|AAH15616.1| 325|Homo sapiens cytochrome c-1 protein. 52 2e-06
BC001006-1|AAH01006.1| 325|Homo sapiens cytochrome c-1 protein. 52 2e-06
Z98752-11|CAI42318.1| 772|Homo sapiens l(3)mbt-like (Drosophila... 31 3.6
Z98752-4|CAC18508.1| 390|Homo sapiens l(3)mbt-like (Drosophila)... 31 3.6
Z98752-3|CAI42311.1| 288|Homo sapiens l(3)mbt-like (Drosophila)... 31 3.6
Z98752-2|CAC16800.1| 538|Homo sapiens l(3)mbt-like (Drosophila)... 31 3.6
U89358-1|AAC69438.1| 772|Homo sapiens l(3)mbt protein homolog p... 31 3.6
BC039820-1|AAH39820.1| 772|Homo sapiens l(3)mbt-like (Drosophil... 31 3.6
AL110279-1|CAB53714.1| 390|Homo sapiens hypothetical protein pr... 31 3.6
AL031681-5|CAI23043.1| 772|Homo sapiens l(3)mbt-like (Drosophil... 31 3.6
AB014581-1|BAA31656.1| 538|Homo sapiens KIAA0681 protein protein. 31 3.6
Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease... 31 4.7
EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein. 31 4.7
AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disea... 31 4.7
AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disea... 31 4.7
AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disea... 31 4.7
>X06994-1|CAA30052.1| 325|Homo sapiens protein ( Human mRNA for
cytochrome c1. ).
Length = 325
Score = 52.0 bits (119), Expect = 2e-06
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = +3
Query: 108 KNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDH 266
+ RKV LS L L AL +V AS E HPP PW+H G SSLDH
Sbjct: 55 RGRKVMLSALGMLAAGGAGLAVALHSAVSASDLEVHPPSYPWSHRGLLSSLDH 107
>BT019798-1|AAV38601.1| 325|Homo sapiens cytochrome c-1 protein.
Length = 325
Score = 52.0 bits (119), Expect = 2e-06
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = +3
Query: 108 KNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDH 266
+ RKV LS L L AL +V AS E HPP PW+H G SSLDH
Sbjct: 55 RGRKVMLSALGMLAAGGAGLAMALHSAVSASDLELHPPSYPWSHRGLLSSLDH 107
>J04444-1|AAA52135.1| 325|Homo sapiens protein ( Human cytochrome
c-1 gene, complete cds. ).
Length = 325
Score = 51.6 bits (118), Expect = 2e-06
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = +3
Query: 108 KNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDH 266
+ RKV LS L L AL +V AS E HPP PW+H G SSLDH
Sbjct: 55 RGRKVMLSALGMLAAGGAGLAVALHSAVSASDLELHPPSYPWSHRGLLSSLDH 107
>DQ300360-1|ABB96244.1| 325|Homo sapiens cytochrome c-1 protein.
Length = 325
Score = 51.6 bits (118), Expect = 2e-06
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = +3
Query: 108 KNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDH 266
+ RKV LS L L AL +V AS E HPP PW+H G SSLDH
Sbjct: 55 RGRKVMLSALGMLAAGGAGLAVALHSAVSASDLELHPPSYPWSHRGLLSSLDH 107
>CR541674-1|CAG46475.1| 325|Homo sapiens CYC1 protein.
Length = 325
Score = 51.6 bits (118), Expect = 2e-06
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = +3
Query: 108 KNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDH 266
+ RKV LS L L AL +V AS E HPP PW+H G SSLDH
Sbjct: 55 RGRKVMLSALGMLAAGGAGLAVALHSAVSASDLELHPPSYPWSHRGLLSSLDH 107
>BC024650-1|AAH24650.1| 315|Homo sapiens Unknown (protein for
IMAGE:4470223) protein.
Length = 315
Score = 51.6 bits (118), Expect = 2e-06
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = +3
Query: 108 KNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDH 266
+ RKV LS L L AL +V AS E HPP PW+H G SSLDH
Sbjct: 45 RGRKVMLSALGMLAAGGAGLAVALHSAVSASDLELHPPSYPWSHRGLLSSLDH 97
>BC020566-1|AAH20566.1| 325|Homo sapiens cytochrome c-1 protein.
Length = 325
Score = 51.6 bits (118), Expect = 2e-06
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = +3
Query: 108 KNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDH 266
+ RKV LS L L AL +V AS E HPP PW+H G SSLDH
Sbjct: 55 RGRKVMLSALGMLAAGGAGLAVALHSAVSASDLELHPPSYPWSHRGLLSSLDH 107
>BC015616-1|AAH15616.1| 325|Homo sapiens cytochrome c-1 protein.
Length = 325
Score = 51.6 bits (118), Expect = 2e-06
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = +3
Query: 108 KNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDH 266
+ RKV LS L L AL +V AS E HPP PW+H G SSLDH
Sbjct: 55 RGRKVMLSALGMLAAGGAGLAVALHSAVSASDLELHPPSYPWSHRGLLSSLDH 107
>BC001006-1|AAH01006.1| 325|Homo sapiens cytochrome c-1 protein.
Length = 325
Score = 51.6 bits (118), Expect = 2e-06
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = +3
Query: 108 KNRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDH 266
+ RKV LS L L AL +V AS E HPP PW+H G SSLDH
Sbjct: 55 RGRKVMLSALGMLAAGGAGLAVALHSAVSASDLELHPPSYPWSHRGLLSSLDH 107
>Z98752-11|CAI42318.1| 772|Homo sapiens l(3)mbt-like (Drosophila)
protein.
Length = 772
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = -2
Query: 211 ASEPDACTDCSSAKSRAPTPPPTTPKVDSHTFLFFCPSLSVGGQLTSLRPN*TIFFQKTC 32
A PD +K+ P PP P+ S CP LS L R + F + C
Sbjct: 496 ADHPDIHPAGWCSKTGHPLQPPLGPREPSSASPGGCPPLSY-RSLPHTRTSKYSFHHRKC 554
Query: 31 PTNPTDGGRH 2
PT DG H
Sbjct: 555 PTPGCDGSGH 564
>Z98752-4|CAC18508.1| 390|Homo sapiens l(3)mbt-like (Drosophila)
protein.
Length = 390
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = -2
Query: 211 ASEPDACTDCSSAKSRAPTPPPTTPKVDSHTFLFFCPSLSVGGQLTSLRPN*TIFFQKTC 32
A PD +K+ P PP P+ S CP LS L R + F + C
Sbjct: 148 ADHPDIHPAGWCSKTGHPLQPPLGPREPSSASPGGCPPLSY-RSLPHTRTSKYSFHHRKC 206
Query: 31 PTNPTDGGRH 2
PT DG H
Sbjct: 207 PTPGCDGSGH 216
>Z98752-3|CAI42311.1| 288|Homo sapiens l(3)mbt-like (Drosophila)
protein.
Length = 288
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = -2
Query: 211 ASEPDACTDCSSAKSRAPTPPPTTPKVDSHTFLFFCPSLSVGGQLTSLRPN*TIFFQKTC 32
A PD +K+ P PP P+ S CP LS L R + F + C
Sbjct: 186 ADHPDIHPAGWCSKTGHPLQPPLGPREPSSASPGGCPPLSY-RSLPHTRTSKYSFHHRKC 244
Query: 31 PTNPTDGGRH 2
PT DG H
Sbjct: 245 PTPGCDGSGH 254
>Z98752-2|CAC16800.1| 538|Homo sapiens l(3)mbt-like (Drosophila)
protein.
Length = 538
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = -2
Query: 211 ASEPDACTDCSSAKSRAPTPPPTTPKVDSHTFLFFCPSLSVGGQLTSLRPN*TIFFQKTC 32
A PD +K+ P PP P+ S CP LS L R + F + C
Sbjct: 282 ADHPDIHPAGWCSKTGHPLQPPLGPREPSSASPGGCPPLSY-RSLPHTRTSKYSFHHRKC 340
Query: 31 PTNPTDGGRH 2
PT DG H
Sbjct: 341 PTPGCDGSGH 350
>U89358-1|AAC69438.1| 772|Homo sapiens l(3)mbt protein homolog
protein.
Length = 772
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = -2
Query: 211 ASEPDACTDCSSAKSRAPTPPPTTPKVDSHTFLFFCPSLSVGGQLTSLRPN*TIFFQKTC 32
A PD +K+ P PP P+ S CP LS L R + F + C
Sbjct: 496 ADHPDIHPAGWCSKTGHPLQPPLGPREPSSASPGGCPPLSY-RSLPHTRTSKYSFHHRKC 554
Query: 31 PTNPTDGGRH 2
PT DG H
Sbjct: 555 PTPGCDGSGH 564
>BC039820-1|AAH39820.1| 772|Homo sapiens l(3)mbt-like (Drosophila)
protein.
Length = 772
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = -2
Query: 211 ASEPDACTDCSSAKSRAPTPPPTTPKVDSHTFLFFCPSLSVGGQLTSLRPN*TIFFQKTC 32
A PD +K+ P PP P+ S CP LS L R + F + C
Sbjct: 496 ADHPDIHPAGWCSKTGHPLQPPLGPREPSSASPGGCPPLSY-RSLPHTRTSKYSFHHRKC 554
Query: 31 PTNPTDGGRH 2
PT DG H
Sbjct: 555 PTPGCDGSGH 564
>AL110279-1|CAB53714.1| 390|Homo sapiens hypothetical protein
protein.
Length = 390
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = -2
Query: 211 ASEPDACTDCSSAKSRAPTPPPTTPKVDSHTFLFFCPSLSVGGQLTSLRPN*TIFFQKTC 32
A PD +K+ P PP P+ S CP LS L R + F + C
Sbjct: 148 ADHPDIHPAGWCSKTGHPLQPPLGPREPSSASPGGCPPLSY-RSLPHTRTSKYSFHHRKC 206
Query: 31 PTNPTDGGRH 2
PT DG H
Sbjct: 207 PTPGCDGSGH 216
>AL031681-5|CAI23043.1| 772|Homo sapiens l(3)mbt-like (Drosophila)
protein.
Length = 772
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = -2
Query: 211 ASEPDACTDCSSAKSRAPTPPPTTPKVDSHTFLFFCPSLSVGGQLTSLRPN*TIFFQKTC 32
A PD +K+ P PP P+ S CP LS L R + F + C
Sbjct: 496 ADHPDIHPAGWCSKTGHPLQPPLGPREPSSASPGGCPPLSY-RSLPHTRTSKYSFHHRKC 554
Query: 31 PTNPTDGGRH 2
PT DG H
Sbjct: 555 PTPGCDGSGH 564
>AB014581-1|BAA31656.1| 538|Homo sapiens KIAA0681 protein protein.
Length = 538
Score = 31.1 bits (67), Expect = 3.6
Identities = 22/70 (31%), Positives = 27/70 (38%)
Frame = -2
Query: 211 ASEPDACTDCSSAKSRAPTPPPTTPKVDSHTFLFFCPSLSVGGQLTSLRPN*TIFFQKTC 32
A PD +K+ P PP P+ S CP LS L R + F + C
Sbjct: 282 ADHPDIHPAGWCSKTGHPLQPPLGPREPSSASPGGCPPLSY-RSLPHTRTSKYSFHHRKC 340
Query: 31 PTNPTDGGRH 2
PT DG H
Sbjct: 341 PTPGCDGSGH 350
>Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 379 LYDQNQGRSKS**I*KLCL*NITVRKNTIFLFYCMKWIVIVYTLGKEKHNTY 534
++ N+GRS S + ++ + N+ R I+LF C KW+ + TL + H T+
Sbjct: 1298 VWHNNEGRSPSWYLSRIKVENLFSRH--IWLFICQKWLSVDTTLDRTFHVTH 1347
>EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.
Length = 2255
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 379 LYDQNQGRSKS**I*KLCL*NITVRKNTIFLFYCMKWIVIVYTLGKEKHNTY 534
++ N+GRS S + ++ + N+ R I+LF C KW+ + TL + H T+
Sbjct: 1298 VWHNNEGRSPSWYLSRIKVENLFSRH--IWLFICQKWLSVDTTLDRTFHVTH 1347
>AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 379 LYDQNQGRSKS**I*KLCL*NITVRKNTIFLFYCMKWIVIVYTLGKEKHNTY 534
++ N+GRS S + ++ + N+ R I+LF C KW+ + TL + H T+
Sbjct: 1298 VWHNNEGRSPSWYLSRIKVENLFSRH--IWLFICQKWLSVDTTLDRTFHVTH 1347
>AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 379 LYDQNQGRSKS**I*KLCL*NITVRKNTIFLFYCMKWIVIVYTLGKEKHNTY 534
++ N+GRS S + ++ + N+ R I+LF C KW+ + TL + H T+
Sbjct: 1298 VWHNNEGRSPSWYLSRIKVENLFSRH--IWLFICQKWLSVDTTLDRTFHVTH 1347
>AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disease
and receptor for egg jelly related protein protein.
Length = 2253
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +1
Query: 379 LYDQNQGRSKS**I*KLCL*NITVRKNTIFLFYCMKWIVIVYTLGKEKHNTY 534
++ N+GRS S + ++ + N+ R I+LF C KW+ + TL + H T+
Sbjct: 1298 VWHNNEGRSPSWYLSRIKVENLFSRH--IWLFICQKWLSVDTTLDRTFHVTH 1347
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,361,801
Number of Sequences: 237096
Number of extensions: 1966003
Number of successful extensions: 5210
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5196
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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