Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8b17
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094773-1|AAM11126.1|  307|Drosophila melanogaster GM14501p pro...    55   7e-08
AE014296-947|AAF50785.1|  307|Drosophila melanogaster CG4769-PA ...    55   7e-08
AY089328-1|AAL90066.1|  344|Drosophila melanogaster AT13706p pro...    45   8e-05
AE014297-4352|AAF56876.1|  344|Drosophila melanogaster CG14508-P...    45   8e-05
AY089669-1|AAL90407.1|  190|Drosophila melanogaster RH40482p pro...    30   2.4  

>AY094773-1|AAM11126.1|  307|Drosophila melanogaster GM14501p
           protein.
          Length = 307

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 26/52 (50%), Positives = 32/52 (61%)
 Frame = +3

Query: 111 NRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDH 266
           N+K+ +  L        AL++ALEQSVQASG E H P   WNH G F +LDH
Sbjct: 38  NKKL-IGALGAITGGVGALIYALEQSVQASGGEVHSPAQLWNHKGLFDALDH 88



 Score = 32.3 bits (70), Expect = 0.59
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 578 SVRRGYEVYKQVC 616
           SVRRGYEVYKQVC
Sbjct: 90  SVRRGYEVYKQVC 102


>AE014296-947|AAF50785.1|  307|Drosophila melanogaster CG4769-PA
           protein.
          Length = 307

 Score = 55.2 bits (127), Expect = 7e-08
 Identities = 26/52 (50%), Positives = 32/52 (61%)
 Frame = +3

Query: 111 NRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDH 266
           N+K+ +  L        AL++ALEQSVQASG E H P   WNH G F +LDH
Sbjct: 38  NKKL-IGALGAITGGVGALIYALEQSVQASGGEVHSPAQLWNHKGLFDALDH 88



 Score = 32.3 bits (70), Expect = 0.59
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 578 SVRRGYEVYKQVC 616
           SVRRGYEVYKQVC
Sbjct: 90  SVRRGYEVYKQVC 102


>AY089328-1|AAL90066.1|  344|Drosophila melanogaster AT13706p
           protein.
          Length = 344

 Score = 45.2 bits (102), Expect = 8e-05
 Identities = 23/51 (45%), Positives = 27/51 (52%)
 Frame = +3

Query: 111 NRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLD 263
           NRK+ L  L         L++ALE SV AS    HP H  WNH G  S+LD
Sbjct: 41  NRKL-LGALGALTGTAGLLIYALETSVDASSDCVHPAHQHWNHKGLLSALD 90



 Score = 28.7 bits (61), Expect = 7.2
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +2

Query: 578 SVRRGYEVYKQVC 616
           SVRRGY VYK+VC
Sbjct: 93  SVRRGYTVYKEVC 105


>AE014297-4352|AAF56876.1|  344|Drosophila melanogaster CG14508-PA
           protein.
          Length = 344

 Score = 45.2 bits (102), Expect = 8e-05
 Identities = 23/51 (45%), Positives = 27/51 (52%)
 Frame = +3

Query: 111 NRKVWLSTLXXXXXXXXALLFALEQSVQASGSEAHPPHNPWNHSGWFSSLD 263
           NRK+ L  L         L++ALE SV AS    HP H  WNH G  S+LD
Sbjct: 41  NRKL-LGALGALTGTAGLLIYALETSVDASSDCVHPAHQHWNHKGLLSALD 90



 Score = 28.7 bits (61), Expect = 7.2
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +2

Query: 578 SVRRGYEVYKQVC 616
           SVRRGY VYK+VC
Sbjct: 93  SVRRGYTVYKEVC 105


>AY089669-1|AAL90407.1|  190|Drosophila melanogaster RH40482p
           protein.
          Length = 190

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 24/58 (41%), Positives = 28/58 (48%)
 Frame = -2

Query: 262 SRELNQPL*FQGL*GG*ASEPDACTDCSSAKSRAPTPPPTTPKVDSHTFLFFCPSLSV 89
           SRE+NQ L FQ      + +    TD     SR PTP     +V S  FL F P LSV
Sbjct: 101 SREINQQLEFQ------SQDQQKTTD-----SRRPTPLRARVRVFSFQFLVFSPDLSV 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,886,702
Number of Sequences: 53049
Number of extensions: 564858
Number of successful extensions: 1907
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1902
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)