Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8b17
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75533-7|CAA99820.1|  285|Caenorhabditis elegans Hypothetical pr...    45   5e-05
Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AF024503-6|AAG24094.1|  388|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z74032-5|CAA98467.1|  219|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF000265-4|AAK68198.1|  457|Caenorhabditis elegans Hypothetical ...    28   6.6  
Z81017-12|CAD91635.1|  394|Caenorhabditis elegans Hypothetical p...    27   8.7  
Z78537-3|CAD91626.1|  394|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z75533-7|CAA99820.1|  285|Caenorhabditis elegans Hypothetical
           protein C54G4.8 protein.
          Length = 285

 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 21/35 (60%), Positives = 23/35 (65%)
 Frame = +3

Query: 165 LLFALEQSVQASGSEAHPPHNPWNHSGWFSSLDHA 269
           L++ALE SV ASG   HP   PW HSG FSS D A
Sbjct: 27  LVYALENSVSASGDNVHPYALPWAHSGPFSSFDIA 61



 Score = 32.3 bits (70), Expect = 0.31
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 578 SVRRGYEVYKQVC 616
           SVRRGYEVYKQVC
Sbjct: 62  SVRRGYEVYKQVC 74


>Z81518-1|CAB04214.3|  601|Caenorhabditis elegans Hypothetical
           protein F28D9.1 protein.
          Length = 601

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -2

Query: 181 SSAKSRAPTPPPTTPKVDS 125
           SS++SR+P PPP  P+ DS
Sbjct: 508 SSSRSRSPPPPPRRPRQDS 526


>Z46793-4|CAA86773.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 161 SNTSTYHSQSGQPHFSVFLSILECWWTADKPEAKLDHI 48
           S T  + S+S    F     +++ WW  DKPE  LD I
Sbjct: 11  SETGIFVSKSAVYPFGNKNEVVKVWWNIDKPENCLDWI 48


>Z34800-5|CAA84325.1|  889|Caenorhabditis elegans Hypothetical
           protein F45H7.6 protein.
          Length = 889

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 161 SNTSTYHSQSGQPHFSVFLSILECWWTADKPEAKLDHI 48
           S T  + S+S    F     +++ WW  DKPE  LD I
Sbjct: 11  SETGIFVSKSAVYPFGNKNEVVKVWWNIDKPENCLDWI 48


>AF024503-6|AAG24094.1|  388|Caenorhabditis elegans Hypothetical
           protein F31F4.17 protein.
          Length = 388

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +1

Query: 457 NTIFLFYCMKWIVIVYTLGKEKHNTYQTSFVIEHLV 564
           N IFLF  M++++ +  L  +K N Y T  +  +++
Sbjct: 11  NNIFLFEIMRFLLFLQLLKMQKSNCYSTKLIRYNII 46


>Z74032-5|CAA98467.1|  219|Caenorhabditis elegans Hypothetical
           protein F35B12.6 protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 202 PDACTDCSSAKSRAPTPPPTTPKVDSH 122
           PD  +D S+ +S +P  PP  P+ D H
Sbjct: 84  PDTISDDSADQSGSPNSPPFVPQGDGH 110


>AF000265-4|AAK68198.1|  457|Caenorhabditis elegans Hypothetical
           protein C18E3.6 protein.
          Length = 457

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 208 SEPDACTDCSSAKSRAPTPPPTTP 137
           S+P A   C+     APTPPP  P
Sbjct: 204 SDPGATPMCNRKSGGAPTPPPPPP 227


>Z81017-12|CAD91635.1|  394|Caenorhabditis elegans Hypothetical
           protein C09F12.3 protein.
          Length = 394

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 466 FLFYCMKWIVIVYTLGKEKHNTYQ 537
           F++ C+  ++ +Y + K +HNTYQ
Sbjct: 225 FMWMCIFSLLTLYEIYKSRHNTYQ 248


>Z78537-3|CAD91626.1|  394|Caenorhabditis elegans Hypothetical
           protein C09F12.3 protein.
          Length = 394

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 466 FLFYCMKWIVIVYTLGKEKHNTYQ 537
           F++ C+  ++ +Y + K +HNTYQ
Sbjct: 225 FMWMCIFSLLTLYEIYKSRHNTYQ 248


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,951,143
Number of Sequences: 27780
Number of extensions: 298047
Number of successful extensions: 988
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)