Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8b16
         (532 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81568-7|CAD18874.1|  497|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z92831-6|CAB07365.2|  355|Caenorhabditis elegans Hypothetical pr...    29   1.6  
Z92777-12|CAJ58496.1|  355|Caenorhabditis elegans Hypothetical p...    29   1.6  
Z81516-6|CAB04206.1|  524|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z75535-5|CAA99829.1|  524|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U97592-1|AAB52871.3|  638|Caenorhabditis elegans Temporarily ass...    28   3.6  
Z49126-3|CAA88941.2|  374|Caenorhabditis elegans Hypothetical pr...    27   6.3  
Z82258-1|CAB05122.2|  906|Caenorhabditis elegans Hypothetical pr...    27   8.4  
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AF016420-7|AAB65303.1|  428|Caenorhabditis elegans Serpentine re...    27   8.4  
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ...    27   8.4  

>Z81568-7|CAD18874.1|  497|Caenorhabditis elegans Hypothetical
           protein K08E3.5d protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 306 ESCLRPFPPAFMKSGIKDMDELLSVITDVPALDLVLQQLDNL 431
           E  +RP+       G K    ++SV  D+  LDL +QQ+  L
Sbjct: 98  EGAIRPYKSLGTSMGCKGPKSVISVRNDLTFLDLTMQQIQTL 139


>Z92831-6|CAB07365.2|  355|Caenorhabditis elegans Hypothetical
           protein F22G12.1 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = +3

Query: 90  IHKMEREHEVLSETGTNCNIASVSETMSDINQTKLDTLEKK 212
           + ++E++ E L +  T  ++ +  ETM  +N+TK + ++KK
Sbjct: 108 VREIEQQREALEKQRTE-DLVNHQETMRKLNETKFEAIKKK 147


>Z92777-12|CAJ58496.1|  355|Caenorhabditis elegans Hypothetical
           protein F22G12.1 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = +3

Query: 90  IHKMEREHEVLSETGTNCNIASVSETMSDINQTKLDTLEKK 212
           + ++E++ E L +  T  ++ +  ETM  +N+TK + ++KK
Sbjct: 108 VREIEQQREALEKQRTE-DLVNHQETMRKLNETKFEAIKKK 147


>Z81516-6|CAB04206.1|  524|Caenorhabditis elegans Hypothetical
           protein F26H9.1 protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +3

Query: 312 CLRPFPPAFMKSG--IKDMDELLSVITDVPALDLVLQQLDNLEAL 440
           CL+ F     +SG  I  + +++   T+ P  D+VL+Q+D++ A+
Sbjct: 204 CLKSFMTLAYESGALIAGLGKMIHAFTNRPDEDIVLEQIDDIVAM 248


>Z75535-5|CAA99829.1|  524|Caenorhabditis elegans Hypothetical
           protein F26H9.1 protein.
          Length = 524

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +3

Query: 312 CLRPFPPAFMKSG--IKDMDELLSVITDVPALDLVLQQLDNLEAL 440
           CL+ F     +SG  I  + +++   T+ P  D+VL+Q+D++ A+
Sbjct: 204 CLKSFMTLAYESGALIAGLGKMIHAFTNRPDEDIVLEQIDDIVAM 248


>U97592-1|AAB52871.3|  638|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 150, isoform b protein.
          Length = 638

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 126 ETGTNCNIASVSETMSDINQTKLDTLEKKAVHLRLVLEK 242
           E GTN NI  + +T S +NQ  L T  + +  L L+ E+
Sbjct: 133 EEGTNLNIEFLKDTTSPMNQLLLLTTIETSTLLNLIEER 171


>Z49126-3|CAA88941.2|  374|Caenorhabditis elegans Hypothetical
           protein DH11.4 protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +3

Query: 357 DMDELLSVITDVPALDLVLQQLDNLEALP-NISDIIDLLFYVLVRLKEPTLKTV-PTDVH 530
           D+ ELL+++T  P +  V   +   +ALP N +    ++ +   RL E    TV P+ VH
Sbjct: 217 DVCELLTILTYAPTVQFVTTTVKKAKALPYNNAPFARIMLFEGRRLMEQKQTTVNPSLVH 276


>Z82258-1|CAB05122.2|  906|Caenorhabditis elegans Hypothetical
           protein C27H2.2a protein.
          Length = 906

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 360 MDELLSVITDVPALDLVLQQLDNLEALPNISDI 458
           +D+LL +    PAL  +   L  +EA P + +I
Sbjct: 657 LDDLLRIAKSAPALPNISNVLTEIEACPEVQEI 689


>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical
           protein B0240.3 protein.
          Length = 1093

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +1

Query: 22  TIQNCQL*IHTNLKLQTEGNVCLFIKWRESTRCY-QKRVPIV 144
           T+ NC L  H  +KL   G   L +KW+ S + + +   P++
Sbjct: 540 TLHNCMLDSHWIVKLSGFGVNRLLVKWKTSGQIFTEDHTPVI 581


>AF016420-7|AAB65303.1|  428|Caenorhabditis elegans Serpentine
           receptor, class r protein8 protein.
          Length = 428

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
 Frame = +3

Query: 150 ASVSETMSDINQTKLDTLEKKAVHLRLVLEK-DFKAADLKWSLFVAAAFSFRYESCLRPF 326
           A+++  +S  N+      E+K +    VLEK DF+   +   +     F+    S L  F
Sbjct: 238 AALNREVSYFNEELKKAKEEKTLRNIGVLEKFDFRQNQILEMIL----FAHESLSSLGGF 293

Query: 327 PPAFMKSGIKDMDELLSVITDVPALDLVL 413
            P FM  G+ +   L S + DVP L  ++
Sbjct: 294 VPLFMYWGLANGVYLTSFVYDVPLLYAII 322


>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
           protein R193.2 protein.
          Length = 1853

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 472 NNKSMISLIFGNASKLSNCCSTKSKAGTSVITLS 371
           NN  +I    GN  KLSNCC   +    +V  L+
Sbjct: 760 NNNLVIFFARGNYEKLSNCCPDPTADAAAVRQLA 793


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,068,130
Number of Sequences: 27780
Number of extensions: 246213
Number of successful extensions: 695
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)