Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8b14
(517 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 3.7
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 3.7
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 3.7
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 22 3.7
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 21 4.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.5
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 21 6.5
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 21 6.5
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.8 bits (44), Expect = 3.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 353 SLTKFIFTISETIPNIP*RLTKLCTRYQII 442
SLT F+ ++ET+P + + L T + I
Sbjct: 252 SLTVFLNLVAETLPQVSDAIPLLGTYFNCI 281
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.8 bits (44), Expect = 3.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 353 SLTKFIFTISETIPNIP*RLTKLCTRYQII 442
SLT F+ ++ET+P + + L T + I
Sbjct: 252 SLTVFLNLVAETLPQVSDAIPLLGTYFNCI 281
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.8 bits (44), Expect = 3.7
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 353 SLTKFIFTISETIPNIP*RLTKLCTRYQII 442
SLT F+ ++ET+P + + L T + I
Sbjct: 252 SLTVFLNLVAETLPQVSDAIPLLGTYFNCI 281
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 21.8 bits (44), Expect = 3.7
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 412 YKVVHKISNNMTYIFSFSIFVCVVTFN 492
++VV K +++ +F S C+V FN
Sbjct: 3 HEVVKKFLHSVRIVFVQSEIFCLVNFN 29
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 21.4 bits (43), Expect = 4.9
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +1
Query: 448 YIFSFSIFVCVVTFNLNPV 504
YIF++ C VT+ +P+
Sbjct: 138 YIFTYLSVTCYVTYAWSPI 156
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 250 HFAIILFTETV 218
HF I+ FTET+
Sbjct: 166 HFLIVFFTETL 176
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 250 HFAIILFTETV 218
HF I+ FTET+
Sbjct: 166 HFLIVFFTETL 176
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 250 HFAIILFTETV 218
HF I+ FTET+
Sbjct: 166 HFLIVFFTETL 176
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1
Query: 250 HFAIILFTETV 218
HF I+ FTET+
Sbjct: 166 HFLIVFFTETL 176
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.0 bits (42), Expect = 6.5
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -3
Query: 509 LKTGFRLKVTTQTKMEKENM*VILFDILCTTL*VFMEYSESFLK 378
+K GFRL+ K + +LF +L + M S F++
Sbjct: 131 IKAGFRLEYKQLLKRSYLIISFVLFSLLARVPVMLMTISADFIQ 174
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 21.0 bits (42), Expect = 6.5
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = -3
Query: 509 LKTGFRLKVTTQTKMEKENM*VILFDILCTTL*VFMEYSESFLK 378
+K GFRL+ K + +LF +L + M S F++
Sbjct: 131 IKAGFRLEYKQLLKRSYLIISFVLFSLLARVPVMLMTISADFIQ 174
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,169
Number of Sequences: 336
Number of extensions: 2223
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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