Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8b14
         (517 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92829-6|CAB07346.1|  214|Caenorhabditis elegans Hypothetical pr...    30   0.85 
AF100307-1|ABB88211.1|  317|Caenorhabditis elegans Hypothetical ...    29   1.5  
U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine rece...    27   8.0  
CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical ...    27   8.0  
CU457743-1|CAM36364.1|  692|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z92829-6|CAB07346.1|  214|Caenorhabditis elegans Hypothetical
           protein F10A3.7 protein.
          Length = 214

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 322 FKKYDVVGQQFINKIHLYHFRNDSEYSMKTYKVVHKISNNMTYIFSFSIFVC 477
           F+    V  +F+N IHL+     S+     YK +    ++ T ++SF  F C
Sbjct: 13  FETIGFVVSEFLNSIHLFLISKMSKQMFGNYKYLMFSFSSFTIVYSFVNFWC 64


>AF100307-1|ABB88211.1|  317|Caenorhabditis elegans Hypothetical
           protein T12B5.6b protein.
          Length = 317

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +1

Query: 349 QFINKIHLYHFRNDSEYSMKTYKVVHKISNNMTYIFSFSIF 471
           QF   IHL H++N  E+S+ + +V  + +N + + F F  F
Sbjct: 191 QFERIIHLEHWKNAEEFSINSRRV--ECTNAIVHFFHFKCF 229


>U55365-5|AAN84867.2|  350|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 11 protein.
          Length = 350

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
 Frame = +1

Query: 355 INKIHLYHFRNDSEY--SMKTYKVVH---KISNNMTYIFSFSIFVCVVTFNLN 498
           I+ I+L HF+N +EY   +K Y  +     I + + + F F + +C   F+ N
Sbjct: 4   IHYINLTHFQNHTEYFPYLKNYLYLEFFLYIIDTIQFSFFFWVMLCAKQFHFN 56


>CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical
           protein K09E10.2 protein.
          Length = 695

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +2

Query: 368 IFTISETIPNIP*RLTKLCTRYQII*PTYSLFPFSSVWSLLT 493
           + T SET+P I   L     R++ I P Y LF F +V SL T
Sbjct: 54  LLTKSETMPVISGVLHFYSRRFKRILPLYLLFIFLTVISLYT 95


>CU457743-1|CAM36364.1|  692|Caenorhabditis elegans Hypothetical
           protein K09E10.1 protein.
          Length = 692

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 18/42 (42%), Positives = 23/42 (54%)
 Frame = +2

Query: 368 IFTISETIPNIP*RLTKLCTRYQII*PTYSLFPFSSVWSLLT 493
           + T SET+P I   L     R++ I P Y LF F +V SL T
Sbjct: 52  LLTKSETMPVISGVLHFYSRRFKRILPLYLLFIFLTVISLYT 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,510,396
Number of Sequences: 27780
Number of extensions: 195038
Number of successful extensions: 471
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)