Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8b12
         (621 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z93393-5|CAB07690.1|  611|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z93377-2|CAB07575.2|  326|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z36719-3|CAA85314.1|  135|Caenorhabditis elegans Hypothetical pr...    27   8.2  
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical...    27   8.2  

>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
            B0207.5 protein.
          Length = 3279

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +1

Query: 397  EFPVCIEFTITGKXLAWKVPIXKLDFHHYL-PMFFDGLAEGTYPYSFIVERGIHDLVTKG 573
            E  + I  TI       +V + KL+ H +L P   +GL EG   +   +  GI   V KG
Sbjct: 2061 EKKIIINPTIPPTPRGERVLVEKLEIHEHLRPDDDEGLLEGNEDFGVRITTGIRKRVIKG 2120

Query: 574  S 576
            S
Sbjct: 2121 S 2121


>Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical
           protein F43G6.1b protein.
          Length = 1069

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 288 DTSITKEHKSSATSKMWRLRSPASETDDVXKMLSXRRISRLHRVHYY 428
           D  +TK  K  A  K+ RL S +S  DD+ KM    ++       YY
Sbjct: 707 DNILTKLTKEVAAEKILRLGSSSSIKDDIKKMTLKAKLENETSEEYY 753


>Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical
           protein F43G6.1a protein.
          Length = 1105

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 288 DTSITKEHKSSATSKMWRLRSPASETDDVXKMLSXRRISRLHRVHYY 428
           D  +TK  K  A  K+ RL S +S  DD+ KM    ++       YY
Sbjct: 743 DNILTKLTKEVAAEKILRLGSSSSIKDDIKKMTLKAKLENETSEEYY 789


>Z93393-5|CAB07690.1|  611|Caenorhabditis elegans Hypothetical
           protein Y48E1B.4 protein.
          Length = 611

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 262 KPRIVPAFTIQALRKNTKVVPPPKCGVFDPL-PPR 363
           K R +P + +Q   +  + +PP +CG+ +PL PPR
Sbjct: 45  KTRWIPQYNLQNFWR--RKIPPLQCGLIEPLIPPR 77


>Z93377-2|CAB07575.2|  326|Caenorhabditis elegans Hypothetical
           protein F13A7.3 protein.
          Length = 326

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 42  TNLPSYFITCVNILDRYYQI 101
           T + SYF+TCV+I+  Y QI
Sbjct: 177 TVMTSYFVTCVSIIIMYSQI 196


>Z36719-3|CAA85314.1|  135|Caenorhabditis elegans Hypothetical
           protein C06C3.7 protein.
          Length = 135

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 306 EHKSSATSKMWRLRSPASETDDVXKMLSXRRISRLHRVHY 425
           +H ++   K+  LR+P  E   + K+    RI R   VHY
Sbjct: 64  QHMTAKEVKIPLLRTPDEEARKIEKLRREARIKRSKEVHY 103


>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
           protein Y47G6A.29 protein.
          Length = 2460

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
 Frame = +1

Query: 445 WKVPIXKLDF-HHYLPMFFDGLAEGTYPYSFI 537
           W+  + K+DF HHY P+          P+S +
Sbjct: 619 WRTELVKMDFDHHYRPLIVKSNIPSDIPFSIL 650


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,963,779
Number of Sequences: 27780
Number of extensions: 255750
Number of successful extensions: 732
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)