Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8b12
         (621 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.60 
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    23   2.4  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.3  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   7.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.7  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   9.7  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 346 DPLPPRPTMFXKCYXRGEFPVCIEFTITGKXLA 444
           + L P P+MF KC   G     I + + GK L+
Sbjct: 403 ETLQPGPSMFLKCVASGNPTPEITWELDGKRLS 435



 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 282 FYDTSITKEHKSSATSKMWRLRSPASETDDVXKMLS 389
           +YDT + KE+     S + +   P+   D V K+LS
Sbjct: 104 YYDTDVNKEYAIRGNSAILKCVVPSFVADFV-KVLS 138


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 72  VNILDRYYQIICLRRFYTVXHVFLIYY 152
           VNI+D+Y +II    F     ++ I+Y
Sbjct: 461 VNIIDKYSRIIFPVSFMLFNAIYWIFY 487


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 411 HRVHYYRKTIGLEGSH 458
           HRV Y+R+ IG+   H
Sbjct: 194 HRVAYWREDIGINLHH 209


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 320 CHLQNVASSIPCLRDRRCSXNVIXEANF 403
           C  +NV   I CLR R     V   ANF
Sbjct: 261 CPTRNVKEMIRCLRYRPARAIVETLANF 288


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 320 CHLQNVASSIPCLRDRRCSXNVIXEANF 403
           C  +NV   I CLR R     V   ANF
Sbjct: 132 CPTRNVKEMIRCLRYRPARAIVETLANF 159


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +2

Query: 320 CHLQNVASSIPCLRDRRCSXNVIXEANF 403
           C  +NV   I CLR R     V   ANF
Sbjct: 261 CPTRNVKEMIRCLRYRPARAIVETLANF 288


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 42  TNLPSYFITCVNILDRYYQI 101
           ++L S++I C+ ++  YY I
Sbjct: 347 SSLSSFYIPCIIMVFLYYNI 366


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 159 FSDNKSKKHDXQCKN 115
           FS+NKSKK+  Q  N
Sbjct: 40  FSNNKSKKYFEQTLN 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,739
Number of Sequences: 438
Number of extensions: 3569
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)