Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte8a24
(476 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54916| Best HMM Match : TB2_DP1_HVA22 (HMM E-Value=4.76441e-44) 159 1e-39
SB_28902| Best HMM Match : TB2_DP1_HVA22 (HMM E-Value=0.088) 57 6e-09
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 31 0.49
SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15) 29 1.5
SB_47115| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_13243| Best HMM Match : COX17 (HMM E-Value=1.7) 28 3.4
SB_5363| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_24362| Best HMM Match : NOGCT (HMM E-Value=3.2) 28 4.5
SB_7842| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_48325| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_35180| Best HMM Match : DUF795 (HMM E-Value=2.1) 27 6.0
SB_52254| Best HMM Match : ANF_receptor (HMM E-Value=7.84727e-44) 27 7.9
SB_56761| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_54916| Best HMM Match : TB2_DP1_HVA22 (HMM E-Value=4.76441e-44)
Length = 210
Score = 159 bits (386), Expect = 1e-39
Identities = 70/128 (54%), Positives = 93/128 (72%)
Frame = +1
Query: 88 DNIEQSLNDKSKPWTKYFELAEQKVGVNRLYIFLGLVAFTGLYLVFGFGAELICNSIGFV 267
+N+E L +K+ +T E+K V +LY+FLGLV LYL+FG+GA+LI +GF
Sbjct: 13 ENLENWLEEKNY-FTDALGKVEEKTKVKKLYLFLGLVGVFSLYLIFGYGADLIVTVLGFA 71
Query: 268 YPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCY 447
YPAY S+KA+ES QKDDDT+WL YWVV+A F+IVE+FSD ++ WFPLY+L K IF+ WC
Sbjct: 72 YPAYQSVKAVESVQKDDDTQWLIYWVVFASFNIVEFFSDILLSWFPLYFLTKLIFLGWCM 131
Query: 448 LPTEYNGS 471
P +NGS
Sbjct: 132 APVSWNGS 139
>SB_28902| Best HMM Match : TB2_DP1_HVA22 (HMM E-Value=0.088)
Length = 110
Score = 57.2 bits (132), Expect = 6e-09
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +1
Query: 172 RLYIFLGLVAFTGLYLVFGFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYW 342
R+ + L +V FT LY+ G+ A CN I V+P Y S+ A+E+P + TKWL YW
Sbjct: 55 RIQVLL-MVLFTLLYVAEGYAAACFCNVIAVVFPVYASISAIENPDYEIGTKWLMYW 110
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 31.1 bits (67), Expect = 0.49
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 266 TKPIELHINSAPKPNTKYKPVNATKPKKMYNLFTPTFCSA 147
T+P+ H S+P+P + + PVN T P TP +A
Sbjct: 225 TQPLSSHSGSSPQPGSAFSPVN-TPPNAQAQQMTPPSSAA 263
>SB_50468| Best HMM Match : Kazal_1 (HMM E-Value=1.3e-15)
Length = 1724
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 151 RLVQNISSMACFCRSDFVLCCLYTLVIWMPL 59
R ++NI + C S F LCC + L W+ L
Sbjct: 100 RTLENIRARRCMRTSAFGLCCRFILAHWVKL 130
>SB_47115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 830
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -1
Query: 344 TQYVSHFVSSSFCGDSRAFIDMYAGYTK 261
T +V HFV + FCG++R+ + + + +
Sbjct: 774 TAFVRHFVLARFCGENRSIVINFRSFNR 801
>SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 28.3 bits (60), Expect = 3.4
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -1
Query: 425 HFNSQYNGNQPTMKSEKYSTIEKQAYTTQYVSHFVSSSFCGDSRAFIDMYAGYTKPIELH 246
+F+++ N T +EKYST + Y+T+ + + + S + Y+ TK E +
Sbjct: 208 NFSTKATENYSTKATEKYSTKASENYSTKATEKYSTKAAENYSTKATEKYS--TKATEKY 265
Query: 245 INSAPKP-NTKYKPVNATKPKKMYN 174
A + +TK +TK K Y+
Sbjct: 266 STKATENFSTKATENYSTKATKNYS 290
>SB_13243| Best HMM Match : COX17 (HMM E-Value=1.7)
Length = 483
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 277 YMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCI 429
Y+ + + P+K D WL + + + YF + I +F WL KCI
Sbjct: 308 YLWGQDISDPRKFLDNTWLKVFKFQPLWKVKNYFGEQIALYFA--WLGKCI 356
>SB_5363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 277 YMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFIVGWFPLYWLLKCI 429
Y+ + + P+K D WL + + + YF + I +F WL KCI
Sbjct: 122 YLWGQDISDPRKFLDNTWLKVFKFQPLWKVKNYFGEQIALYFA--WLGKCI 170
>SB_24362| Best HMM Match : NOGCT (HMM E-Value=3.2)
Length = 273
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = -1
Query: 440 QITKMHFNSQYNGNQPTMKSEKYSTIEKQAYTTQYVSHFVSSSFCGDSRAFIDMYAGYTK 261
Q+ + N N+ K KYS+ +Q Y ++ VSS F F Y T+
Sbjct: 137 QMVEFVITGNPNENKTHGKWPKYSSENRQVYQAAFIESGVSSDFLAQKADFWTRYLPQTE 196
>SB_7842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 46 LKDRTMASKLQEYKDNIEQSLNDKSKPWTKYFELAE-QKVGVNRLYIFLG 192
LKD+T ASK E + EQS+ K + K+ L + Q +Y F G
Sbjct: 43 LKDKTKASKATEKPEIFEQSVMGKVQTNIKFHNLEDRQDYRDESVYTFCG 92
>SB_48325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 872
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 52 DRTMASKLQEYKDNIEQSLNDKSKP 126
DRT K++E N+++S +D SKP
Sbjct: 89 DRTKKDKVEERPPNLQKSFSDFSKP 113
>SB_35180| Best HMM Match : DUF795 (HMM E-Value=2.1)
Length = 388
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 55 RTMASKLQEYKDNIEQSLNDKSKPWTKYFELAEQK 159
R +SKLQ+YK Q+L+ W +Y + +K
Sbjct: 190 RDKSSKLQQYKYEKTQALDSNFPKWKEYIQQEAKK 224
>SB_52254| Best HMM Match : ANF_receptor (HMM E-Value=7.84727e-44)
Length = 933
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/55 (18%), Positives = 28/55 (50%)
Frame = +1
Query: 226 GFGAELICNSIGFVYPAYMSMKALESPQKDDDTKWLTYWVVYACFSIVEYFSDFI 390
GF LI N+ + Y + + PQ ++++++ + ++ C +++ Y ++
Sbjct: 550 GFSVWLIYNAGLVIICTYQAFLVRKVPQNYNESRFIAFTMITICITVLVYVPSYL 604
>SB_56761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/33 (27%), Positives = 20/33 (60%)
Frame = -1
Query: 422 FNSQYNGNQPTMKSEKYSTIEKQAYTTQYVSHF 324
+N++YN + T + +Y+T Y T+Y++ +
Sbjct: 334 YNTEYNTDYNTEYNTEYNTEYNTEYNTEYITEY 366
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,596,587
Number of Sequences: 59808
Number of extensions: 336499
Number of successful extensions: 1361
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 989515521
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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