Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8a23
         (527 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   6.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   6.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.9  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 116 VEYLRHAIITSSLSHVMLCSCYLQLYRWM 202
           ++YL   +I +    V+L SC+    +W+
Sbjct: 80  LDYLDEFLIVALAFQVILNSCFCDPAKWI 108


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 116 VEYLRHAIITSSLSHVMLCSCYLQLYRWM 202
           ++YL   +I +    V+L SC+    +W+
Sbjct: 80  LDYLDEFLIVALAFQVILNSCFCDPAKWI 108


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 339 PTHNIADTHALVTAVGTGKGLRPGMAN 419
           PT +I    +  TAVG   GLR  +AN
Sbjct: 51  PTPDIIWVRSDGTAVGDVPGLRQVLAN 77


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 287 GYNFPNVTDNFSELSNVFLE 228
           G   PN+TD+ + L+N  L+
Sbjct: 524 GRQEPNMTDSLTRLANSALD 543


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,118
Number of Sequences: 336
Number of extensions: 2407
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)