Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8a23
         (527 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0557 + 11470259-11472307                                         30   1.3  
02_02_0552 + 11426761-11428815                                         30   1.3  
09_02_0628 + 11364169-11364233,11365135-11365648                       28   4.0  
04_03_0566 + 17209455-17209565,17210159-17210203,17211456-172115...    28   4.0  
03_05_0366 - 23505755-23506441                                         28   4.0  
02_05_1153 - 34501778-34502961,34503052-34503219,34503306-34504263     28   5.3  
09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468           27   7.1  
05_03_0575 - 15643819-15644295                                         27   7.1  
08_01_0187 + 1572014-1572180,1572266-1572422,1573047-1573097,157...    27   9.3  

>02_02_0557 + 11470259-11472307
          Length = 682

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 223 LYSRNTLLNSLKLSVTFGKLYPKAAKTGKES 315
           LY+R+T L +  ++ TFG + P+ A TGK S
Sbjct: 517 LYNRDTELQTTVVAGTFGYMAPELALTGKAS 547


>02_02_0552 + 11426761-11428815
          Length = 684

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 223 LYSRNTLLNSLKLSVTFGKLYPKAAKTGKES 315
           LY+R+T L +  ++ TFG + P+ A TGK S
Sbjct: 519 LYNRDTELQTTVVAGTFGYMAPELALTGKAS 549


>09_02_0628 + 11364169-11364233,11365135-11365648
          Length = 192

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
 Frame = +3

Query: 210 DYNSFIFQKHIAQFTKVVSHVWEIISKGREDWEGESMRSTGMQPTHN-IADTHALVTAVG 386
           D+  F F  H A F + +  +   I  G+  WE   +  + MQPT++ I  +   ++ V 
Sbjct: 93  DWTYFHFL-HFANFEQQLRQL--DIYYGKNKWEYSPLSLSSMQPTYSPIVASLCNISIVA 149

Query: 387 TGKGLRPGMANMV 425
           T   + P M N +
Sbjct: 150 TNTSVLPPMLNAI 162


>04_03_0566 +
           17209455-17209565,17210159-17210203,17211456-17211569,
           17211943-17212081,17212324-17212415,17213245-17213517
          Length = 257

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 11/47 (23%), Positives = 24/47 (51%)
 Frame = +3

Query: 255 KVVSHVWEIISKGREDWEGESMRSTGMQPTHNIADTHALVTAVGTGK 395
           K+V++ W    +  E WE  +      +P H ++D++ +   + TG+
Sbjct: 10  KMVANSWHPFEEAAEPWEKSTGGHATRKPEHFLSDSYRINETMTTGE 56


>03_05_0366 - 23505755-23506441
          Length = 228

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +2

Query: 365 CFSNGSRNGKRATTRYGEYGWSRGSW 442
           C S+G R+G     R G  GW R  W
Sbjct: 78  CGSSGGRHGGHRRQRQGGSGWERHPW 103


>02_05_1153 - 34501778-34502961,34503052-34503219,34503306-34504263
          Length = 769

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 17/68 (25%), Positives = 25/68 (36%)
 Frame = +3

Query: 189 YIDG*CMDYNSFIFQKHIAQFTKVVSHVWEIISKGREDWEGESMRSTGMQPTHNIADTHA 368
           Y+DG C D +     K    F K  + +     + R    G + +  G  PT        
Sbjct: 313 YLDGGCKDIDECQRTKEYPCFGKCTNTIGSYTCECRPGTSGNATQENGCLPTDKFTLALK 372

Query: 369 LVTAVGTG 392
           +VT V  G
Sbjct: 373 VVTGVSVG 380


>09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468
          Length = 1078

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 94  QTNLDYIKELIIHSLIEFNDD 32
           Q  +DY KELI+ +L+E +DD
Sbjct: 474 QLGMDYYKELIMRNLLEPHDD 494


>05_03_0575 - 15643819-15644295
          Length = 158

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 400 SPFPVPTAVTKACVSAMLCVGCIPVDL 320
           SP P  +A   ACV+  + VGC P+ L
Sbjct: 117 SPTPERSADMGACVAIAVAVGCTPLSL 143


>08_01_0187 +
           1572014-1572180,1572266-1572422,1573047-1573097,
           1573371-1573463,1573595-1573681
          Length = 184

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 18/53 (33%), Positives = 28/53 (52%)
 Frame = +3

Query: 240 IAQFTKVVSHVWEIISKGREDWEGESMRSTGMQPTHNIADTHALVTAVGTGKG 398
           IAQF KV++  W    + R  W+ + +  +G  P+ + A   AL  AVG  +G
Sbjct: 46  IAQFIKVLT-TW--YKENR--WDAKQLVGSGGMPSSHSATVVALAVAVGLQEG 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,367,697
Number of Sequences: 37544
Number of extensions: 225977
Number of successful extensions: 495
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)