Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8a23
         (527 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3002|AAM68406.1|  252|Drosophila melanogaster CG13867-P...    83   3e-16
AY071108-1|AAL48730.1|  252|Drosophila melanogaster RE16440p pro...    82   5e-16

>AE013599-3002|AAM68406.1|  252|Drosophila melanogaster CG13867-PA
           protein.
          Length = 252

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 46/103 (44%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
 Frame = +3

Query: 234 KHIAQFTKVVSHVWEIISKGREDWEGESMRSTGMQPTHNIADTHALVTAVGTGKGLR--- 404
           K + Q+ KVVSHV +++SK RE+WE ES   TG+Q T ++ADT  LV AVG GKGL+   
Sbjct: 138 KQVTQYNKVVSHVLDMVSKAREEWEIESSSRTGIQQTSSMADTQLLVAAVGMGKGLKLTN 197

Query: 405 --PGMANMVGQXXXXXXXXXXXXXQLGPAPSTLPKAPSAIKTN 527
             PG   MV                 G     L KAPSA+KTN
Sbjct: 198 YGPGPGMMVPPSIRAPSPMGGPAMSPGNVQQQLGKAPSAVKTN 240


>AY071108-1|AAL48730.1|  252|Drosophila melanogaster RE16440p
           protein.
          Length = 252

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 46/103 (44%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
 Frame = +3

Query: 234 KHIAQFTKVVSHVWEIISKGREDWEGESMRSTGMQPTHNIADTHALVTAVGTGKGLR--- 404
           K + Q+ KVVSHV +++SK RE+WE ES   TG+Q T ++ADT  LV AVG GKGL+   
Sbjct: 138 KQVTQYNKVVSHVPDMVSKAREEWEIESSSRTGIQQTSSMADTQLLVAAVGMGKGLKLTN 197

Query: 405 --PGMANMVGQXXXXXXXXXXXXXQLGPAPSTLPKAPSAIKTN 527
             PG   MV                 G     L KAPSA+KTN
Sbjct: 198 YGPGPGMMVPPSIRAPSPMGGPAMSPGNVQQQLGKAPSAVKTN 240


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,193,763
Number of Sequences: 53049
Number of extensions: 392426
Number of successful extensions: 1196
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)