Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte8a22
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   3.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.5  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.6  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 98  KLENDGLDIKNCRGQAYDNAAVM 166
           KL ND L+I  CR    DN+ ++
Sbjct: 193 KLSNDKLEITACRLFKIDNSLIL 215


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -3

Query: 533 MRHDYCRTKKNHNKTEIAKRNKPIKHFQEDSLSADV 426
           + H Y    K H+KT   KR  P+      ++ A +
Sbjct: 290 LTHKYTHEIKLHDKTPFLKRPYPVPFALRPAVDATI 325


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
 Frame = -2

Query: 315 NKSRANKGRAIEWSMSTSARDGCLYRNGASIGMINASL--NTAVLSMPCIRAMTAAL 151
           N SR + G+ +   +  +  DG L      IGM  A L  N   ++    +A   AL
Sbjct: 59  NPSRLDSGKELYIKIIPNKNDGTLTIIDTGIGMTKADLVHNLGTIAKSGTKAFMEAL 115


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/34 (26%), Positives = 13/34 (38%)
 Frame = -2

Query: 408 TKGNKTNKNFQEEHLVGRCTTNTGRANNGRANKS 307
           T  +  N       L G+C  N     NG+  +S
Sbjct: 752 TNPHDINNPLSVNQLTGQCVRNDSSDTNGKETRS 785



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 196 RCAFHAVHPCHDGSIIVSLS 137
           RC +HAV P  D    ++LS
Sbjct: 614 RCCYHAVAPGTDIRQSIALS 633


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/34 (26%), Positives = 13/34 (38%)
 Frame = -2

Query: 408 TKGNKTNKNFQEEHLVGRCTTNTGRANNGRANKS 307
           T  +  N       L G+C  N     NG+  +S
Sbjct: 644 TNPHDINNPLSVNQLTGQCVRNDSSDTNGKETRS 677



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 196 RCAFHAVHPCHDGSIIVSLS 137
           RC +HAV P  D    ++LS
Sbjct: 506 RCCYHAVAPGTDIRQSIALS 525


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 79  DFNSSFSFSFYKVNKRFYN 23
           DF    S+ FYK+N   Y+
Sbjct: 425 DFQYYVSYDFYKMNHPVYH 443


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -2

Query: 138 PLQFFISKPSFSNFVKIISVIST 70
           PL++ I + +F+N V +  ++ T
Sbjct: 75  PLKYAIFQKNFTNIVNLTHLLET 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,197
Number of Sequences: 336
Number of extensions: 2320
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)